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Article Dans Une Revue Journal of Applied Crystallography Année : 2010

phenix.model_vs_data : a high-level tool for the calculation of crystallographic model and data statistics

Pavel Afonine
  • Fonction : Auteur
Ralf Grosse-Kunstleve
  • Fonction : Auteur
Vincent Chen
  • Fonction : Auteur
Jeffrey Headd
  • Fonction : Auteur
Nigel Moriarty
  • Fonction : Auteur
Jane Richardson
  • Fonction : Auteur
David Richardson
  • Fonction : Auteur
Peter Zwart
  • Fonction : Auteur
Paul Adams
  • Fonction : Auteur

Résumé

phenix.model_vs_data is a high-level command-line tool for the computation of crystallographic model and data statistics, and the evaluation of the fit of the model to data. Analysis of all Protein Data Bank structures that have experimental data available shows that in most cases the reported statistics, in particular R factors, can be reproduced within a few percentage points. However, there are a number of outliers where the recomputed R values are significantly different from those originally reported. The reasons for these discrepancies are discussed.

Domaines

Cristallographie

Dates et versions

hal-04086755 , version 1 (02-05-2023)

Identifiants

Citer

Pavel Afonine, Ralf Grosse-Kunstleve, Vincent Chen, Jeffrey Headd, Nigel Moriarty, et al.. phenix.model_vs_data : a high-level tool for the calculation of crystallographic model and data statistics. Journal of Applied Crystallography, 2010, 43 (4), pp.669-676. ⟨10.1107/S0021889810015608⟩. ⟨hal-04086755⟩
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