Principles of genome folding into topologically associating domains

Quentin Szabo (1) , Frederic Bantignies (1) , Giacomo Cavalli (1)

1 IGH - Institut de génétique humaine

Understanding the mechanisms that underlie chromosome folding within cell nuclei is essential to determine the relationship between genome structure and function. The recent application of "chromosome conformation capture" techniques has revealed that the genome of many species is organized into domains of preferential internal chro-matin interactions called "topo logically associating domains" (TADs). This chromosome compartmentalization has emerged as a key feature of higher-order genome organization and function through evolution. Although TADs have now been described in a wide range of organisms, they appear to have specific characteristics in terms of size, structure, and proteins involved in their formation. Here, we depict the main features of these domains across species and discuss the relation between chromatin structure, genome activity, and epigenome, highlighting mecha-nistic principles of TAD formation. We also consider the potential influence of TADs in genome evolution.

Domaines: Biochimie, Biologie Moléculaire; Génétique

Quentin Szabo, Frederic Bantignies, Giacomo Cavalli. Principles of genome folding into topologically associating domains. Science Advances , 2019, 5 (4), pp.eaaw1668. ⟨10.1126/sciadv.aaw1668⟩. ⟨hal-02990881⟩