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Pré-Publication, Document De Travail Année : 2009

Field Theory of the RNA Freezing Transition

Résumé

Folding of RNA is subject to a competition between entropy, relevant at high temperatures, and the random, or random looking, sequence, determining the low- temperature phase. It is known from numerical simulations that for random as well as biological sequences, high- and low-temperature phases are different, e.g. the exponent rho describing the pairing probability between two bases is rho = 3/2 in the high-temperature phase, and approximatively 4/3 in the low-temperature (glass) phase. Here, we present, for random sequences, a field theory of the phase transition separating high- and low-temperature phases. We establish the existence of the latter by showing that the underlying theory is renormalizable to all orders in perturbation theory. We test this result via an explicit 2-loop calculation, which yields rho approximatively 1.36 at the transition, as well as diverse other critical exponents, including the response to an applied external force (denaturation transition).

Dates et versions

hal-00663986 , version 1 (27-01-2012)

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François David, Kay Joerg Wiese. Field Theory of the RNA Freezing Transition. 2009. ⟨hal-00663986⟩
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