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Utilisation de grilles de calcul pour la génomique comparative

Abstract : Large scale phylogenomics and comparative genomics require complex computational methods (parsimony, maximum likelihood, bayesian methods, MCMC, etc.) associated with massively distributed calculation. In this respect, grid computing plays a crucial role. Here we present how we processed exhaustive similarity searches on several millions of sequences with BLAST, using two different grids (TIDRA and GRISBI).
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https://hal.archives-ouvertes.fr/hal-00653022
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Submitted on : Friday, December 16, 2011 - 5:24:35 PM
Last modification on : Monday, February 10, 2020 - 4:36:47 PM
Document(s) archivé(s) le : Saturday, March 17, 2012 - 2:42:39 AM

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  • HAL Id : hal-00653022, version 1

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Simon Penel, Christophe Blanchet, Pascal Calvat, Yonny Cardenas, Clement Gauthey, et al.. Utilisation de grilles de calcul pour la génomique comparative. Rencontres Scientifiques France Grilles 2011, Sep 2011, Lyon, France. ⟨hal-00653022⟩

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