J. Ahrens, B. Geveci, and C. Law, Paraview: An end-user tool for large-data visualization, The Visualization Handbook, 2005.

J. Ahrens, S. Jourdain, P. O'leary, J. Patchett, D. H. Rogers et al., An image-based approach to extreme scale in situ visualization and analysis, 2014.

U. Ayachit, A. C. Bauer, B. Geveci, P. O'leary, K. Moreland et al., Paraview catalyst: Enabling in situ data analysis and visualization, Situ Infrastructures for Enabling Extreme-Scale Analysis and Visualization, p.2015, 2015.

S. Bachthaler and D. Weiskopf, Continuous scatterplots. IEEE TVCG, 2008.

T. F. Banchoff, Critical points and curvature for embedded polyhedral surfaces, Amer. Math. Monthly, 1970.

H. Carr, Z. Geng, J. Tierny, A. Chattopadhyay, and A. Knoll, Fiber surfaces: Generalizing isosurfaces to bivariate data, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01198912

F. Chazal, L. J. Guibas, S. Y. Oudot, and P. Skraba, Persistence-based clustering in riemannian manifolds, J, 2013.
URL : https://hal.archives-ouvertes.fr/hal-01094872

H. Edelsbrunner and J. Harer, Jacobi Sets of Multiple Morse Functions, 2004.

H. Edelsbrunner and J. Harer, Computational Topology: An Introduction, p.10, 2009.

M. Falk, C. Garth, C. Gueunet, J. A. Levine, J. Lukasczyk et al., Topological Data Analysis Made Easy with the Topology ToolKit, A Sequel, Proc. of IEEE VIS Tutorials, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02267191

G. Favelier, N. Faraj, B. Summa, and J. Tierny, Persistence Atlas for Critical Point Variability in Ensembles, IEEE TVCG, 2018.
URL : https://hal.archives-ouvertes.fr/hal-01838103

G. Favelier, C. Gueunet, A. Gyulassy, J. Jomier, J. Levine et al., Topological data analysis made easy with the Topology ToolKit, Proc. of IEEE VIS Tutorials, 2018.
URL : https://hal.archives-ouvertes.fr/hal-01819096

G. Favelier, C. Gueunet, and J. Tierny, Visualizing ensembles of viscous fingers, IEEE SciVis Contest, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01359694

D. Guenther, J. Salmon, and J. Tierny, Mandatory critical points of 2D uncertain scalar fields, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01206152

C. Gueunet, P. Fortin, J. Jomier, and J. Tierny, Contour Forests: Fast Multi-threaded Augmented Contour Trees, Proc. of IEEE LDAV, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01355328

C. Gueunet, P. Fortin, J. Jomier, and J. Tierny, Task-based Augmented Merge Trees with Fibonacci heaps, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01575019

C. Gueunet, P. Fortin, J. Jomier, and J. Tierny, Task-based Augmented Contour Trees with Fibonacci heaps, IEEE TPDS, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02010580

C. Gueunet, P. Fortin, J. Jomier, and J. Tierny, Task-based Augmented Reeb Graphs with Dynamic ST-Trees, Eurographics Symposium on Parallel Graphics and Visualization, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02159825

E. Jakobsson, T. Bin-masood, I. Hotz, I. Abrikosov, and P. Steneteg, Topology-guided analysis and visualization of charge density fields : A case study, 2019.

D. Jönsson, P. Steneteg, E. Sundén, R. Englund, S. Kottravel et al., Inviwo -a visualization system with usage abstraction levels, IEEE TVCG, 2019.

M. Kerber, D. Morozov, and A. Nigmetov, Geometry helps to compare persistence diagrams, ACM Journal of Experimental Algorithmics, 2016.

P. Klacansky, J. Tierny, H. A. Carr, and Z. Geng, Fast and exact fiber surfaces for tetrahedral meshes, IEEE, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01206120

M. Kontak, J. Vidal, and J. Tierny, Statistical Parameter Selection for Clustering Persistence Diagrams, Proc. of SuperComputing workshop on Urgent HPC, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02321869

T. Lacombe, M. Cuturi, and S. Oudot, Large Scale computation of Means and Clusters for Persistence Diagrams using Optimal Transport, 2018.
URL : https://hal.archives-ouvertes.fr/hal-01966674

J. Lukasczyk, E. Kinner, J. Ahrens, H. Leitte, and C. Garth, Voidga: A view-approximation oriented image database generation approach, Proc. of IEEE LDAV, 2018.

J. Lukasczyk, G. H. Weber, R. Maciejewski, C. Garth, and H. Leitte, Nested tracking graphs, 2017.

U. Von-luxburg, A tutorial on spectral clustering, Statistics and Computing, 2007.

D. Morozov, Dionysus, 2010.

V. Pascucci, X. Tricoche, H. Hagen, and J. Tierny, Topological Data Analysis and Visualization: Theory, Algorithms and Applications, 2010.

F. Pedregosa, G. Varoquaux, A. Gramfort, V. Michel, B. Thirion et al., Scikit-learn: Machine learning in python, 2011.
URL : https://hal.archives-ouvertes.fr/hal-00650905

M. Soler, M. Plainchault, B. Conche, and J. Tierny, Lifted wasserstein matcher for fast and robust topology tracking, Proc. of IEEE LDAV, 2018.
URL : https://hal.archives-ouvertes.fr/hal-01857913

M. Soler, M. Plainchault, B. Conche, and J. Tierny, Topologically controlled lossy compression, Proc. of PV, 2018.
URL : https://hal.archives-ouvertes.fr/hal-01703832

J. Tierny, Topological Data Analysis for Scientific Visualization, 2018.
URL : https://hal.archives-ouvertes.fr/tel-01310926

J. Tierny and H. Carr, Jacobi fiber surfaces for bivariate reeb space computation, IEEE TVCG, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01349907

J. Tierny, G. Favelier, J. A. Levine, C. Gueunet, and M. Michaux, The Topology ToolKit. IEEE TVCG, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01499905

J. Tierny and V. Pascucci, Generalized topological simplification of scalar fields on surfaces, IEEE TVCG, 2012.
URL : https://hal.archives-ouvertes.fr/hal-01206877

;. Ttk-contributors, . Ttk-online, and . Tutorials, TTK-Contributors: TTK User Forum

. Ttk-contributors, Tutorial on In-situ Topological Data Analysis with TTK and Catalyst

. Ttk-contributors, , 2019.

K. Turner, Y. Mileyko, S. Mukherjee, and J. Harer, Fréchet Means for Distributions of Persistence Diagrams, Disc. Compu. Geom, 2014.

. Vecstec-consortium, Visual Exploration and Sampling ToolKit for Extreme Computing

J. Vidal, J. Budin, and J. Tierny, Progressive Wasserstein Barycenters of Persistence Diagrams, IEEE TVCG, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02179674

A. Vintescu, F. Dupont, G. Lavoué, P. Memari, and J. Tierny, Conformal factor persistence for fast hierarchical cone extraction, Eurographics, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01508966

K. Xu, H. Zhang, D. Cohen-or, and Y. Xiong, Dynamic harmonic fields for surface processing, Computers & Graphics, 2009.