High Throughput Sequencing of siRNAs and virus diagnostic: does sequence analysis strategies really matter? Results of an international proficiency testing

Sébastien Massart (1) , Ian Adams (2) , Michela Chiumenti (3) , Kris de Jonghe (4) , Igor Koloniuk (5) , Petr Komínek (6) , Jan Kreuze (7) , Denis Kutnjak (8) , Leonidas Lotos (9) , Hans J. Maree (10) , Thibaut Olivier (11) , Mikhail Pooggin (12) , Ana B. Ruiz-Garcia (13) , Dana Safarova (14) , Pierre H. H. Schneeberger (15) , Noa Sela (16) , Eva Varallyay (17) , Eeva J. Vainio (18) , Eric Verdin (19) , Marcel Westenberg (20) , Yves Brostaux (21) , Thierry T. Candresse (22)

1 Université de Liège
2 Food and Environment Research Agency
3 IPSP - CNR Istituto per la Protezione Sostenibile delle Piante [Torino, Italia]
4 ILVO - Research Institute for Agricultural, Fisheries and Food
5 IPMB / BIOLOGY CENTRE CAS - Institute of Plant Molecular Biology [Branišovská]
6 Crop Research Institute
7 International Potato Center
8 National Institute of Biology
9 Aristotle University of Thessaloniki
10 Stellenbosch University
11 Walloon Agricultural Research Centre
12 Unibas - Université de Bâle = University of Basel = Basel Universität
13 IVIA - Instituto Valenciano de Investigaciones Agrarias - Institut Valencià d'Investigacions Agraries - Valencian Institute for agricultural Research
14 Palacky University Olomouc
15 Agroscope
16 Agricultural Research Organization
17 Agricultural Biotechnology Research Institute
18 LUKE - Natural Resources Institute Finland
19 PV - Unité de Pathologie Végétale
20 King‘s College London
21 Gembloux Agro-Bio Tech [Gembloux]
22 BFP - Biologie du fruit et pathologie

High Throughput Sequencing of siRNAs and virus diagnostic: does sequence analysis strategies really matter? Results of an international proficiency testing. 16. Rencontres de Virologie Végétale (RVV 2017)

Mots clés: diagnostic; NGS; validation; detection; plant health; phytopathogenic virus

Mots clés: santé des plantes; virologie végétale; maladie des plantes; pathologie végétale; virus phytopathogène

Domaines: Biologie végétale; Phytopathologie et phytopharmacie; Virologie; Sciences agricoles

Sébastien Massart, Ian Adams, Michela Chiumenti, Kris de Jonghe, Igor Koloniuk, et al.. High Throughput Sequencing of siRNAs and virus diagnostic: does sequence analysis strategies really matter? Results of an international proficiency testing. 16. Rencontres de Virologie Végétale (RVV 2017), Jan 2017, Aussois, France. 2017. ⟨hal-01604506⟩