R. Svanbä-ck and L. Persson, Individual diet specialization, niche width and population dynamics: implications for trophic polymorphisms, J Anim Ecol, vol.73, pp.973-982, 2004.

R. Knudsen, R. Primicerio, P. A. Amundsen, and A. Klemetsen, Incipient speciation through niche expansion: an example from the Arctic charr in a subarctic lake, J Anim Ecol, vol.79, pp.161-168, 2010.

R. Svanbä-ck and D. I. Bolnick, Intraspecific competition drives increased resource use diversity within a natural population, Proc R Soc London Ser B, vol.274, pp.839-844, 2007.

M. A. Purnell, M. A. Bell, D. C. Baines, D. I. Hart, and M. P. Travis, Correlated evolution and dietary change in fossil stickleback, Science, vol.317, p.1887, 2007.

A. Herrel, B. Vanhooydonck, and R. Van-damme, Omnivory in lacertid lizards: adaptive evolution or constraint?, J Evol Biol, vol.17, pp.974-984, 2004.

F. Luca, G. H. Perry, D. Rienzo, and A. , Evolutionary adaptations to dietary changes, Annu Rev Nutr, vol.30, pp.291-314, 2010.

G. H. Perry, N. J. Dominy, K. G. Claw, A. S. Lee, and H. Fiegler, Diet and the evolution of human amylase gene copy number variation, Nature Genet, vol.39, pp.1256-1260, 2007.

C. Ingram, C. A. Mulcare, Y. Itan, M. G. Thomas, and D. M. Swallow, Lactose digestion and the evolutionary genetics of lactase persistence, Hum Genet, vol.124, pp.579-591, 2009.

A. Helgason, S. Palsson, G. Thorleifsson, S. Grant, and V. Emilsson, Refining the impact of TCF7L2 gene variants on type 2 diabetes and adaptive evolution, Nature Genet, vol.39, pp.218-225, 2007.

T. N. Kristensen, J. Overgaard, V. Loeschcke, and D. Mayntz, Dietary protein content affects evolution for body size, body fat and viability in Drosophila melanogaster, Biology Letters, vol.7, pp.269-272, 2010.

V. H. Nielsen and I. R. Korsgaard, Effects of selection for growth on normal and reduced protein diets on weight gain, feed intake, feed efficiency and body composition in mice, J Anim Breed Genet, vol.123, pp.362-368, 2006.

D. Pauly, V. Christensen, S. Guenette, T. J. Pitcher, and U. R. Sumaila, Towards sustainability in world fisheries, Nature, vol.418, pp.689-695, 2002.

A. Tacon and M. Metian, Global overview on the use of fish meal and fish oil in industrially compounded aquafeeds: Trends and future prospects, Aquaculture, vol.285, pp.146-158, 2008.

. Fao, The state of the world fisheries and aquaculture, 2008.

R. L. Naylor, R. W. Hardy, D. P. Bureau, A. Chiu, and M. Eliott, Feeding aquaculture in an era of finite resources, Proc Natl Acad Sci U S A, vol.106, pp.15103-15110, 2009.

G. M. Turchini, B. E. Torstensen, and W. Ng, Fish oil replacement in finfish nutrition, Rev Aquaculture, vol.1, pp.10-57, 2009.

S. Panserat, G. A. Hortopan, E. Plagnes-juan, C. Kolditz, and M. Lansard, Differential gene expression after total replacement of dietary fish meal and fish oil by plant products in rainbow trout (Oncorhynchus mykiss) liver, Aquaculture, vol.294, pp.123-131, 2009.
URL : https://hal.archives-ouvertes.fr/hal-01193491

D. Montero and M. S. Izquierdo, Health and welfare of fish fed vegetable oils as alternative lipid sources to fish oil, Fish oil replacement and alternative lipid sources in aquaculture feeds, pp.439-485, 2010.

J. M. Blanc, Interaction between diet and genetic aptitude for weight and growth in juvenile rainbow trout, Oncorhynchus mykiss (Walbaum), Aquac Res, vol.33, pp.563-568, 2002.
URL : https://hal.archives-ouvertes.fr/hal-02669791

L. R. Pierce, Y. Palti, J. Silverstein, F. T. Barrows, and E. M. Hallerman, Family growth response to fishmeal and plant-based diets shows genotype x diet interaction in rainbow trout (Oncorhynchus mykiss), Aquaculture, vol.278, pp.37-42, 2008.

M. Dupont-nivet, F. Médale, J. Leonard, L. Guillou, S. Tiquet et al., Evidence of genotype-diet interactions in the response of rainbow trout (Oncorhynchus mykiss) clones to a diet with or without fishmeal at early growth, Aquaculture, vol.295, pp.15-21, 2009.
URL : https://hal.archives-ouvertes.fr/hal-01193406

C. D. Quinton, A. Kause, J. Koskela, and O. Ritola, Breeding salmonids for feed efficiency in current fishmeal and future plant-based diet environments, Genet Sel Evol, vol.39, p.431, 2007.
URL : https://hal.archives-ouvertes.fr/hal-00894602

K. Overturf, F. T. Barroxs, and R. W. Hardy, Effect and interaction of rainbow trout strain (Oncorhynchus mykiss) and diet type on growth and nutrient retention, Aquac Res, 2012.

M. Vandeputte, E. Quillet, and B. Chevassus, Early development and survival in brown trout (Salmo trutta fario L.): indirect effects of selection for growth rate and estimation of genetic parameters, Aquaculture, vol.204, pp.435-445, 2002.
URL : https://hal.archives-ouvertes.fr/hal-02670869

, Nutrition requirements of fish, 2011.

J. Folch, M. Lees, S. Stanley, and G. H. , A simple method for the isolation and purification of total lipids from animal tissues, J Biol Chem, vol.226, pp.497-509, 1957.

N. Richard, S. Kaushik, L. Larroquet, S. Panserat, and G. Corraze, Replacing dietary fish oil by vegetable oils has little effect on lipogenesis, lipid transport and tissue lipid uptake in rainbow trout (Oncorhynchus mykiss), Brit J Nutr, vol.96, pp.299-309, 2006.
URL : https://hal.archives-ouvertes.fr/hal-02662375

L. Boucher, R. Quillet, E. Vandeputte, M. Lecalvez, J. M. Goardon et al., Plant-based diet in trout (O. mykiss): are there genotype-diet interactions for main production traits when fish are fed marine vs. plant-based diets from the first meal, Aquaculture, vol.321, pp.41-48, 2011.
URL : https://hal.archives-ouvertes.fr/hal-01193727

D. Pauly, V. Christensen, J. Dalsgaard, R. Froese, and F. Torres, Fishing down marine food webs, Science, vol.279, pp.860-863, 1998.