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Automatic multiple sclerosis lesion segmentation with P-LOCUS

 Senan Doyle , Florence Forbes , Michel Dojat
Proceedings of the 1st MICCAI Challenge on Multiple Sclerosis Lesions Segmentation Challenge Using a Data Management and Processing Infrastructure — MICCAI-MSSEG, pp.17-21, 2016
Chapitre d'ouvrage inserm-01417434v1
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TriadNet: Sampling-free predictive intervals for lesional volume in 3D brain MR images

 Benjamin Lambert , Florence Forbes , Senan Doyle , Michel Dojat
UNSURE 2023 - 5th International Workshop on Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, Oct 2023, Vancouver (BC), Canada. ⟨10.48550/arXiv.2307.15638⟩
Communication dans un congrès hal-04436218v1
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Multi-layer Aggregation as a key to feature-based OOD detection

 Benjamin Lambert , Florence Forbes , Senan Doyle , Michel Dojat
UNSURE 2023 - 5th International Workshop on Uncertainty for Safe Utilization of Machine Learning in Medical Imaging, Oct 2023, Vancouver, Canada. ⟨10.48550/arXiv.2307.15647⟩
Communication dans un congrès hal-04436227v1

Spatio-temporal Markov Random Field approach to risk mapping

 Lamiae Azizi , Florence Forbes , Senan Doyle , Myriam Garrido , David Abrial
ASMDA2011 - 14th Applied Stochastic Models and Data Analysis, ASMDA International Society, Jun 2011, Rome, Italy
Communication dans un congrès hal-00780518v1
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Fast Uncertainty Quantification for Deep Learning-based MR Brain Segmentation

 Benjamin Lambert , Florence Forbes , Senan Doyle , Alan Tucholka , Michel Dojat
EGC 2022 - Conference francophone pour l'Extraction et la Gestion des Connaissances, Jan 2022, Blois, France. pp.1-12
Communication dans un congrès hal-03498120v1
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Safety-Net : Identification automatique des erreurs de segmentation des lésions de la Sclérose-en-Plaques

 Benjamin Lambert , Florence Forbes , Senan Doyle , Alan Tucholka , Michel Dojat
SFRMBM 2023 - 6ème Congrès Scientifique de la Société Française de Résonance Magnétique en Biologie et Médecine, SFRMBM, Mar 2023, Paris, France
Communication dans un congrès hal-04126182v1
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Spatial risk mapping for rare disease with hidden Markov fields and variational EM

 Lamiae Azizi , Florence Forbes , Senan Doyle , Myriam Garrido , David Abrial
[Research Report] RR-7572, INRIA. 2011
Rapport inria-00577793v1
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Beyond Voxel Prediction Uncertainty: Identifying brain lesions you can trust

 Benjamin Lambert , Florence Forbes , Senan Doyle , Alan Tucholka , Michel Dojat
iMIMIC 2022 - Workshop on Interpretability of Machine Intelligence in Medical Image Computing, Sep 2022, Singapore, Singapore. pp.61-70, ⟨10.1007/978-3-031-17976-1_6⟩
Communication dans un congrès hal-03883749v1
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Uncertainty-based Quality Control for Subcortical Structures Segmentation in T1-weighted Brain MRI

 Benjamin Lambert , Florence Forbes , Senan Doyle , Alan Tucholka , Michel Dojat
ISMRM 2023 - International Society for Magnetic Resonance in Medicine, Jun 2023, Toronto, Canada. pp.1-4
Communication dans un congrès hal-04126201v1
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Anisotropic Hybrid Networks for liver tumor segmentation with uncertainty quantification

 Benjamin Lambert , Pauline Roca , Florence Forbes , Senan Doyle , Michel Dojat
REMIA 2023 - 2nd Workshop on Resource-Efficient Medical Image Analysi, Oct 2023, Vancouver (BC), Canada. ⟨10.48550/arXiv.2308.11969⟩
Communication dans un congrès hal-04436251v1

Initialisation de l'algorithme EM champ-moyen pour les mélanges de Poisson pour données spatiales et application à la cartographie du risque en épidémiologie

 Lamiae Azizi , Florence Forbes , Myriam Garrido , David Abrial , Senan Doyle
43e Journées de Statistique, Société Française de Statistique, May 2011, Tunis, Tunisia
Communication dans un congrès hal-00780572v1
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Spatial risk mapping for rare disease with hidden Markov fields and variational EM

 Florence Forbes , Myriam Garrido , Lamiae Azizi , Senan Doyle , David Abrial
Annals of Applied Statistics, 2013, 7 (2), pp.1192-1216. ⟨10.1214/13-AOAS629⟩
Article dans une revue hal-00839184v1
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Multi-Scale Evaluation of Uncertainty Quantification Techniques for Deep Learning based MRI Segmentation

 Benjamin Lambert , Florence Forbes , Alan Tucholka , Senan Doyle , Michel Dojat
ISMRM-ESMRMB & ISMRT 2022 - 31st Joint Annual Meeting International Society for Magnetic Resonance in Medecine, May 2022, London, United Kingdom. pp.1-3
Communication dans un congrès hal-03578023v1
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Intervalles de confiance pour l'estimation de superficies à partir d'images satellitaires

 Benjamin Lambert , Florence Forbes , Senan Doyle , Alan Tucholka , Michel Dojat
GRETSI 2023 - XXIXème Colloque Francophone de Traitement du Signal et des Images, Aug 2023, Grenoble, France. pp.1-4
Communication dans un congrès hal-04140049v1
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Adaptive weighted fusion of multiple MR sequences for brain lesion segmentation

 Florence Forbes , Senan Doyle , Daniel Garcia-Lorenzo , Christian Barillot , Michel Dojat
2010 IEEE International Symposium on Biomedical Imaging: From Nano to Macro, Apr 2010, Rotterdam, Netherlands. pp.69-72, ⟨10.1109/ISBI.2010.5490413⟩
Communication dans un congrès inserm-00723807v1
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Trustworthy clinical AI solutions: a unified review of uncertainty quantification in deep learning models for medical image analysis

 Benjamin Lambert , Florence Forbes , Alan Tucholka , Senan Doyle , Harmonie Dehaene , et al.
2022
Pré-publication, Document de travail hal-03806630v1

On the difficulty to delimit disease risk hot spots

 Myriam Garrido , Lamiae Azizi , Florence Forbes , Senan Doyle , Nicolas Peyrard , et al.
International Journal of Applied Earth Observation and Geoinformation, 2012, Spatial Statistics for Mapping the Environment, 22, pp.99-105. ⟨10.1016/j.jag.2012.04.005⟩
Article dans une revue istex hal-00780054v1
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Leveraging 3D information in unsupervised brain MRI segmentation

 Benjamin Lambert , Maxime Louis , Senan Doyle , Florence Forbes , Michel Dojat , et al.
ISBI 2021 - 18th International Symposium on Biomedical Imaging, Apr 2021, Nice / Virtual, France. pp.1-4
Communication dans un congrès hal-03273953v1
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A Weighted Multi-Sequence Markov Model For Brain Lesion Segmentation

 Florence Forbes , Senan Doyle , Daniel Garcia-Lorenzo , Christian Barillot , Michel Dojat
13th International Conference on Artificial Intelligence and Statistics - AISTATS 2010, May 2010, Sardinia, Italy. pp.225-232
Communication dans un congrès inserm-00723808v1
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Assessment of Tissue Injury in Severe Brain Trauma

 Christophe Maggia , Senan Doyle , Florence Forbes , Olivier Heck , Irène Troprès , et al.
Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries. , 9556, Springer International Publishing, pp.57-68, 2016, Lecture Notes in Computer Science, 978-3-319-30857-9. ⟨10.1007/978-3-319-30858-6_6⟩
Chapitre d'ouvrage hal-01423467v1
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Traumatic Brain Lesion Quantification based on Mean Diffusivity Changes

 Christophe Maggia , Thomas Mistral , Senan Doyle , Florence Forbes , Alexandre Krainik , et al.
Brainlesion: Glioma, Multiple Sclerosis, Stroke and Traumatic Brain Injuries, BrainLes (MICCAI), 10670, Springer, pp.88-99, 2018, Lecture Notes in Computer Science, ⟨10.1007/978-3-319-75238-9_8⟩
Chapitre d'ouvrage hal-01704679v1

Segmentation des tumeurs cérébrales de bas grade par une approche bayésienne : délinéation manuelle versus automatique

 Senan Doyle , Benjamin Lemasson , Flor Vasseur , Pierre Bourdillion , François Ducray , et al.
2ème congrès de la SFRMBM (Société Française de Résonance Magnétique en Biologie et Médecine), Mar 2015, Grenoble, France
Communication dans un congrès hal-01107520v1

Automated Quantification of Brain Lesion Volume From Post-trauma MR Diffusion-Weighted Images

 Thomas Mistral , Pauline Roca , Christophe Maggia , Alan Tucholka , Florence Forbes , et al.
Frontiers in Neurology, 2022, 12, pp.740603. ⟨10.3389/fneur.2021.740603⟩
Article dans une revue hal-03593111v1

Comparison of manual versus automatic delineation of low-grade gliomas based on MR brain scans

 Senan Doyle , Benjamin Lemasson , Flor Vasseur , Pierre Bourdillion , François Ducray , et al.
Organization for Human Brain Mapping (OHBM) 2014 Annual meeting, Jun 2014, Hambourg, Germany
Communication dans un congrès hal-01107700v1
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Objective Evaluation of Multiple Sclerosis Lesion Segmentation using a Data Management and Processing Infrastructure

 Olivier Commowick , Audrey Istace , Michael Kain , Baptiste Laurent , Florent Leray , et al.
Scientific Reports, 2018, 8 (1), pp.13650. ⟨10.1038/s41598-018-31911-7⟩
Article dans une revue inserm-01847873v3
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The Multimodal Brain Tumor Image Segmentation Benchmark (BRATS)

 Bjoern Menze , Andras Jakab , Stefan Bauer , Jayashree Kalpathy-Cramer , Keyvan Farahani , et al.
IEEE Transactions on Medical Imaging, 2014, 34 (10), pp.1993-2024. ⟨10.1109/TMI.2014.2377694⟩
Article dans une revue hal-00935640v2
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