C. Castera, Sandrine Bouguen (L3), Gabriel Bathie (L3)

T. Bonnafont, Jean Eymerie (IUT)

A. Nguyen, Valentin Debarnot (M1), Bastien Kovac (IUT), Vincent Remenant (IUT)

Q. Gey,

P. Escande, Léo Mouly (License), Alexandre Receveur (IUT), Omar Dounia (M1)

N. Chauffert, Paul Escande (M1), Emmanuel Soubies (M1), Charlotte Emery (M1), Léo Mouly (IUT)

C. Boyer and M. Bouyrie,

A. Flinth, . De-gournay, . Frédéric, and P. Weiss, On the linear convergence rates of exchange and continuous methods for total variation minimization, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02136598

C. Lazarus, M. März, and P. Weiss, Correcting the side effects of ADC filtering in MR image reconstruction, 2018.
URL : https://hal.archives-ouvertes.fr/hal-01817643

E. Soubies, P. Weiss, and X. Descombes, Graph cut based segmentation of predefined shapes : Applications to biological imaging, Pattern Recognition Applications and Methods, pp.153-170, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01088384

, Journal articles (international)

L. Aoun, . Larnier, . Stanislas, P. Weiss, A. Herbulot et al., Measure and characterization of the forces exerted by growing multicellular spheroids using microdevice arrays, In : PLOS ONE, 2019.

C. Boyer, A. Chambolle, D. Castro, Y. Duval, V. De-gournay et al., On Representer Theorems and Convex Regularization, In : SIAM journal on Optimization, 2019.
URL : https://hal.archives-ouvertes.fr/hal-01823135

V. Debarnot, P. Escande, and P. Weiss, A scalable estimator of sets of integral operators, Inverse Problems, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02174477

V. Debarnot, J. Kahn, and P. Weiss, Multiview Attenuation Estimation and Correction, Journal of Mathematical Imaging Vision, 2019.
URL : https://hal.archives-ouvertes.fr/hal-01429148

J. Fehrenbach, B. Kovac, L. Guillaume, and P. Weiss, FitEllipsoid : a fast supervised ellipsoid segmentation plugin, BMC Bioinformatics, 2019.
URL : https://hal.archives-ouvertes.fr/hal-01520337

C. Lazarus, P. Weiss, E. Gueddari, . Loubna, F. Mauconduit et al., 3D Sparkling trajectories for high-resolution T2*-weighted Magnetic Resonance Imaging, In : NMR in biomedicine, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02067080

C. Lazarus, P. Weiss, A. Vignaud, and P. Ciuciu, SPARKLING : variable-density k-space filling curves for accelerated T2*-weighted MRI, Magnetic Resonance in Medicine, 2019.

L. Lebrat, . De-gournay, . Frédéric, J. Kahn, and P. Weiss, Optimal transport approximation of densities, SIAM journal on Imaging Science, 2019.

P. Weiss, P. Escande, G. Bathie, and Y. Dong, Contrast Invariant SNR, International Journal of Computer Vision, 2019.
URL : https://hal.archives-ouvertes.fr/hal-01370251

A. Desmaison, L. Guillaume, S. Triclin, P. Weiss, B. Ducommun et al., Impact of physical confinement on nuclei geometry and cell division dynamics in 3D spheroids, Nature Scientific Reports, 2018.

P. Escande and P. Weiss, Accelerating l1-l2 deblurring using wavelet expansions of operators, Journal of Computational and Applied Mathematics, vol.343, pp.373-396, 2018.

A. Flinth and P. Weiss, Exact solutions of infinite dimensional total-variation regularized problems, Information & Inference, 2018.
URL : https://hal.archives-ouvertes.fr/hal-01572196

C. Lazarus and P. Weiss, An Empirical Study of the Maximum Degree of Undersampling in Compressed Sensing for T2*-weighted MRI, In : Magnetic Resonance Imaging, 2018.
URL : https://hal.archives-ouvertes.fr/hal-01829323

J. Bigot, P. Escande, and P. Weiss, Estimation of linear operators from scattered impulse responses, Applied and Computational Harmonic Analysis, pp.1063-5203, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01380584

C. Boyer, J. Bigot, and P. Weiss, Compressed sensing with structured sparsity and structured acquisition, Applied and Computational Harmonic Analysis, pp.1063-5203, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01149456

N. Chauffert, P. Ciuciu, J. Kahn, and P. Weiss, A projection method on measures sets, Constructive Approximation, vol.45, pp.83-111, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01133398

P. Escande and P. Weiss, Approximation of Integral Operators Using Product-Convolution Expansions, Journal of Mathematical Imaging and Vision, vol.58, pp.1573-7683, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01301235

P. Escande, P. Weiss, and W. Zhang, A variational model for multiplicative structured noise removal, Journal of Mathematical Imaging and Vision, vol.57, pp.43-55, 2017.

J. Bigot, C. Boyer, and P. Weiss, An analysis of block sampling strategies in compressed sensing, IEEE Transactions on Information Theory, vol.62, pp.2125-2139, 2016.
URL : https://hal.archives-ouvertes.fr/hal-00823711

C. Boyer, N. Chauffert, P. Ciuciu, J. Kahn, and P. Weiss, On the generation of sampling schemes for magnetic resonance imaging, SIAM Journal on Imaging Sciences, vol.9, issue.4, pp.2039-2072, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01373758

N. Chauffert, P. Weiss, J. Kahn, and P. Ciuciu, A projection algorithm for gradient waveforms design in Magnetic Resonance Imaging, IEEE transactions on medical imaging, vol.35, pp.2026-2039, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01317939

W. Zhang, J. Fehrenbach, A. Desmaison, V. Lobjois, B. Ducommun et al., Structure Tensor Based Analysis of Cells and Nuclei Organization in Tissues, IEEE Transactions on Medical Imaging, vol.35, pp.294-306, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01037972

P. Escande and P. Weiss, Sparse wavelet representations of spatially varying blurring operators, SIAM Journal on Imaging Sciences, vol.8, issue.4, pp.2976-3014, 2015.
URL : https://hal.archives-ouvertes.fr/hal-00971549

L. Aoun, P. Weiss, A. Laborde, and B. Ducommun, Microdevice arrays of high aspect ratio poly (dimethylsiloxane) pillars for the investigation of multicellular tumour spheroid mechanical properties, Lab on a Chip, vol.14, pp.2344-2353, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01764849

C. Boyer, P. Weiss, and J. Bigot, An algorithm for variable density sampling with block-constrained acquisition, SIAM Journal on Imaging Sciences, vol.7, issue.2, pp.1080-1107, 2014.
URL : https://hal.archives-ouvertes.fr/hal-00873873

N. Chauffert, P. Ciuciu, J. Kahn, and P. Weiss, Variable Density Sampling with Continuous Trajectories, SIAM Journal on Imaging Sciences, vol.7, issue.4, pp.1962-1992, 2014.
URL : https://hal.archives-ouvertes.fr/hal-00908486

J. Fehrenbach and P. Weiss, Processing stationary noise : Model and parameter selection in variational methods, SIAM Journal on Imaging Sciences, vol.7, pp.613-640, 2014.
URL : https://hal.archives-ouvertes.fr/hal-00845212

A. Hoyos-idrobo, P. Weiss, and A. Massire, On variant strategies to solve the magnitude least squares optimization problem in parallel transmission pulse design and under strict SAR and power constraints, Medical Imaging, vol.33, pp.739-748, 2014.
URL : https://hal.archives-ouvertes.fr/hal-00858823

J. Fehrenbach, P. Weiss, and C. Lorenzo, Variational algorithms to remove stationary noise : applications to microscopy imaging, Image Processing, vol.21, pp.4420-4430, 2012.

C. Lorenzo, Live cell division dynamics monitoring in 3D large spheroid tumor models using light sheet microscopy, Cell division, vol.6, p.22, 2011.
URL : https://hal.archives-ouvertes.fr/hal-00691571

P. Weiss, A. Fournier, L. Blanc-féraud, and G. Aubert, On the illumination invariance of the level lines under directed light : Application to change detection, SIAM Journal on Imaging Sciences, vol.4, issue.1, pp.448-471, 2011.
URL : https://hal.archives-ouvertes.fr/inria-00310383

K. Michael, P. Ng, X. Weiss, and . Yuan, Solving constrained total-variation image restoration and reconstruction problems via alternating direction methods, SIAM journal on Scientific Computing, vol.32, pp.2710-2736, 2010.

M. Poole, P. Weiss, H. S. Lopez, M. Ng, and S. Crozier, Minimax current density coil design, Journal of Physics D : Applied Physics, vol.43, p.95001, 2010.

P. Weiss, L. Blanc-féraud, and G. Aubert, Efficient schemes for total variation minimization under constraints in image processing, SIAM journal on Scientific Computing, vol.31, pp.2047-2080, 2009.
URL : https://hal.archives-ouvertes.fr/inria-00166096

, Journal articles (national)

M. Carlavan, P. Weiss, and L. Blanc-féraud, Régularité et parcimonie pour les problèmes inverses en imagerie : algorithmes et comparaisons". In : Traitement du signal, 2010.

, Conference articles (international)

C. Boyer, J. Kahn, M. März, and P. Weiss, Compressed sensing and the synthesis formulation, Proceedings SPARS, 2019.

V. Debarnot and P. Weiss, A scalable estimator of space varying blurs -application in super-resolution, Proceedings SPARS, 2019.

V. Debarnot, P. Escande, T. Mangeat, and P. Weiss, Blind-deblurring : a learning based approach, Proceedings of OSA, Mathematics in imaging, 2019.

A. Flinth and P. Weiss, Iterative Discretization of Optimization Problems Related to Superresolution, Proceedings SAMPTA, 2019.

A. Flinth, F. De-gournay, and P. Weiss, Eventual linear convergence rate of an exchange algorithm for super-resolution, Proceedings SPARS, 2019.

C. Lazarus, P. Weiss, L. E. Gueddari, A. Vignaud, and P. Ciuciu, 3D SPARKLING for accelerated ex vivo T2*-weighted MRI with compressed sensing, Proceedings 27th Scientific Meeting, 2019.

V. Debarnot, P. Escande, and P. Weiss, A scalable estimator of sets of integral operators, Proceedings of iTWIST 2018, 2018.
URL : https://hal.archives-ouvertes.fr/hal-02174477

C. Lazarus, P. Weiss, L. E. Gueddari, F. Mauconduit, and I. Zemmoura, Distributioncontrolled and optimally spread non-Cartesian sampling curves for accelerated in vivo brain imaging at 7 Tesla, Proceedings 26th Scientific Meeting, 2018.

V. Debarnot, J. Kahn, and P. Weiss, Multiview Attenuation Computation and Correction, SPARS Proceedings. SPARS, 2017.

V. Debarnot, J. Kahn, and P. Weiss, Multiview Attenuation Computation and Correction, Mathematics in Imaging, pp.1-2, 2017.

C. Lazarus, P. Weiss, N. Chauffert, F. Mauconduit, . Vignaud et al., SPARKLING : Novel Non-Cartesian Sampling Schemes for Accelerated 2D Anatomical Imaging at 7T Using Compressed Sensing, Proceedings 25th Scientific Meeting, International Society for Magnetic Resonance in Medicine, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01577200

N. Chauffert, P. Weiss, M. Boucher, S. Mé-riaux, and P. Ciuciu, Variable density sampling based on physically plausible gradient waveform. Application to 3D MRI angiography, ISBI proceedings, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01119578

J. Fehrenbach, M. Nikolova, G. Steidl, and P. Weiss, Bilevel Image Denoising Using Gaussianity Tests, Scale Space and Variational Methods in Computer Vision, pp.117-128, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01494632

L. Aoun, S. Larnier, P. Weiss, A. Herbulot, and B. Ducommun, PDMS microdevice arrays for measuring the forces exerted by growing multicellular tumor spheroids, The 18th International Conference on Miniaturized Systems for Chemistry and Life Sciences, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01097774

A. Huck, P. François-de-vieilleville, M. Weiss, and . Grizonnet, Hyperspectral pan-sharpening : a variational convex constrained formulation to impose parallel level lines, solved with ADMM, Proceedings of Whispers, 2014.

P. G-le-corre, B. Weiss, . Ducommun, and . Lorenzo, Optical signature of multicellular tumor spheroid using index-mismatch-induced spherical aberrations, SPIE BiOS. International Society for Optics et Photonics, pp.894111-894111, 2014.

C. Boyer, J. Bigot, and P. Weiss, A theoretical analysis of a sampling strategy among blocks of measurements for compressed sensing, SampTA-10th Conference International Conference on Sampling Theory and Applications, 2013.

N. Chauffert, P. Ciuciu, F. Gamboa, and P. Weiss, From variable density sampling to continuous sampling using Markov chains, SampTA-10th Conference International Conference on Sampling Theory and Applications, 2013.
URL : https://hal.archives-ouvertes.fr/hal-00848286

N. Chauffert, P. Ciuciu, J. Kahn, and P. Weiss, Travelling salesman-based variable density sampling, SampTA-10th Conference International Conference on Sampling Theory and Applications, pp.509-512, 2013.
URL : https://hal.archives-ouvertes.fr/hal-00848290

N. Chauffert, P. Ciuciu, and P. Weiss, Variable density compressed sensing in MRI. Theoretical VS heuristic sampling strategies, IEEE 10th International Symposium on. IEEE. 2013, pp.298-301, 2013.
URL : https://hal.archives-ouvertes.fr/hal-00848271

P. Escande, P. Weiss, and F. Malgouyres, Image restoration using sparse approximations of spatially varying blur operators in the wavelet domain, Journal of Physics : Conference Series. T. 464. 1, p.12004, 2013.
URL : https://hal.archives-ouvertes.fr/hal-00794274

P. Escande, P. Weiss, and F. Malgouyres, Spatially varying blur recovery. diagonal approximations in the wavelet domain, Proceedings of ICPRAM, 2013.
URL : https://hal.archives-ouvertes.fr/hal-00733194

E. Soubies, P. Weiss, and X. Descombes, A 3D Segmentation Algorithm for Ellipsoidal Shapes-Application to Nuclei Extraction, In : ICPRAM, pp.97-105, 2013.
URL : https://hal.archives-ouvertes.fr/hal-00733187

C. Boyer, P. Ciuciu, P. Weiss, and S. Mériaux, HYR 2 PICS : Hybrid regularized reconstruction for combined parallel imaging and compressive sensing in MRI, 9th IEEE International Symposium on, pp.66-69, 2012.
URL : https://hal.archives-ouvertes.fr/cea-00691623

J. Fehrenbach, P. Weiss, and C. Lorenzo, Variational algorithms to remove stripes : a generalization of the negative norm models, Proc. ICPRAM, pp.1-6, 2012.

M. Kowalski and P. Weiss, Accelerating ISTA with an active set strategy, OPT 2011 : 4th International Workshop on Optimization for Machine Learning, p.7, 2011.
URL : https://hal.archives-ouvertes.fr/hal-00696992

P. F-de-vieilleville, V. Weiss, . Lobjois, and . Kouamé, Alternating direction method of multipliers applied to 3D light sheet fluorescence microscopy image deblurring using GPU hardware, Engineering in Medicine and Biology Society, pp.4872-4875, 2011.

. Ms-poole, H. Weiss, M. Sanchez-lopez, . Ng, and . Crozier, Minimax Current Density Coil Design, Proceedings of the International Society for Magnetic Resonance in Medicine. T. 18, 2010.

. Ms-poole, H. Weiss, M. Sanchez-lopez, . Ng, and . Crozier, Temperature Characteristics of Gradient Coils with Minimax Current Density, Proceedings of the International Society for Magnetic Resonance in Medicine. T. 18, p.564, 2010.

M. Carlavan and P. Weiss, Complex wavelet regularization for solving inverse problems in remote sensing, Geoscience and Remote Sensing Symposium, p.212, 2009.
URL : https://hal.archives-ouvertes.fr/inria-00417708

P. Weiss and L. Blanc-féraud, A proximal method for inverse problems in image processing, Signal Processing Conference, pp.1374-1378, 2009.
URL : https://hal.archives-ouvertes.fr/inria-00417712

P. Weiss and M. Carlavan, Smoothing techniques for convex problems. Applications in image processing, 2009.
URL : https://hal.archives-ouvertes.fr/inria-00417713

A. Fournier, P. Weiss, L. Blanc-féraud, and G. Aubert, A contrast equalization procedure for change detection algorithms : applications to remotely sensed images of urban areas, Pattern Recognition, pp.1-4, 2008.
URL : https://hal.archives-ouvertes.fr/inria-00307727

P. Weiss, L. Blanc-féraud, T. André, and M. Antonini, Compression artifacts reduction using variational methods : algorithms and experimental study, Acoustics, Speech and Signal Processing, pp.1173-1176, 2008.

, Conference articles (national)

,. De-gournay, . Frédéric, J. Kahn, L. Lebrat, and P. Weiss, Approches variationnelles pour le stippling : distances L2 ou transport optimal ?, In : GRETSI Proceedings, 2017.
URL : https://hal.archives-ouvertes.fr/hal-01880687

C. Lazarus, P. Weiss, N. Chauffert, A. Vignaud, and P. Ciuciu, SPARKLING : nouveaux schémas d'échan-tillonnage compressif prospectif pour l'IRM haute résolution, GRETSI Proceedings, 2017.

C. Boyer, J. Bigot, and P. Weiss, Echantillonnage compressé avec acquisition structurée et parcimonie structurée, Proceedings of GRETSI, 2015.

N. Chauffert, P. Ciuciu, J. Kahn, and P. Weiss, Comment représenter une image avec un spaghetti ?, In : Proceedings of GRETSI, 2015.

P. Escande and P. Weiss, Approximation et Estimation des Opé-rateurs de Flou Variable, Proceedings of GRETSI, 2015.

P. Weiss, N. Chauffert, P. Ciuciu, and J. Kahn, Sur la génération de schémas d'échantillonnage compressé en IRM, Proceedings of GRETSI, 2015.

P. François-de-vieilleville and . Weiss, Restauration 3D en imagerie fluorescente par feuille de lumière avec implantation sur GPU, Proceedings of GRETSI, 2011.

M. Carlavan and P. Weiss, Algorithme rapide pour la restauration d'image régularisée sur les coefficients d'ondelettes, GRETSI 2009. GRETSI, Groupe d'Etudes du Traitement du Signal et des Images, 2009.

M. Carlavan and P. Weiss, Reconstruction d'images satellitaires à partir d'un échantillon-nage irrégulier, 2008.

P. Weiss, L. Blanc-féraud, and G. Aubert, Sur la complexité et la rapidité d'algorithmes pour la minimisation de la variation totale sous contraintes, 2007.

A. Beck and M. Teboulle, A fast iterative shrinkage-thresholding algorithm for linear inverse problems, SIAM journal on imaging sciences, vol.2, pp.183-202, 2009.

A. Chambolle, An algorithm for total variation minimization and applications, In : Journal of Mathematical imaging and vision, vol.20, pp.89-97, 2004.

M. Jalal, G. Fadili, and . Peyré, Total variation projection with first order schemes, IEEE Transactions on Image Processing, vol.20, pp.657-669, 2011.

Y. Nesterov, Smooth minimization of non-smooth functions, Mathematical programming, vol.103, pp.127-152, 2005.

C. Alexandre-d'aspremont, M. Guzmán, and . Jaggi, Optimal Affine-Invariant Smooth Minimization Algorithms, SIAM Journal on Optimization, vol.28, pp.2384-2405, 2018.

E. Richard and . Barlow, Statistical inference under order restrictions ; the theory and application of isotonic regression, Rapp. tech, 1972.

R. Kyng, A. Rao, and S. Sachdeva, Fast, Provable Algorithms for Isotonic Regression in all L p -norms, Advances in Neural Information Processing Systems, pp.2701-2709, 2015.

. Daniel-a-spielman, . Shang-hua, and . Teng, Nearly-linear time algorithms for graph partitioning, graph sparsification, and solving linear systems, Proceedings of the thirty-sixth annual ACM symposium on Theory of computing, pp.81-90, 2004.

D. Amelunxen, M. Lotz, B. Michael, . Mccoy, and . Tropp, Living on the edge : Phase transitions in convex programs with random data, In : Information and Inference : A Journal of the IMA, vol.3, pp.224-294, 2014.

V. Kolmogorov, T. Pock, and M. Rolinek, Total variation on a tree, SIAM Journal on Imaging Sciences, vol.9, issue.2, pp.605-636, 2016.

Q. F. Stout, Fastest Isotonic Regression Algorithms, 2014.

M. Unser, J. Fageot, and J. Ward, Splines Are Universal Solutions of Linear Inverse Problems with Generalized TV Regularization, SIAM Review, vol.59, pp.769-793, 2017.

V. Chandrasekaran, B. Recht, P. A. Parrilo-et-alan, and S. Willsky, The convex geometry of linear inverse problems, Foundations of Computational mathematics, vol.12, pp.805-849, 2012.

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J. Emmanuel, C. Candès, and . Fernandez-granda, Towards a Mathematical Theory of Super-resolution, Communications on Pure and Applied Mathematics, vol.67, pp.906-956, 2014.

V. Duval and G. Peyré, Exact support recovery for sparse spikes deconvolution, Foundations of Computational Mathematics, vol.15, pp.1315-1355, 2015.
URL : https://hal.archives-ouvertes.fr/hal-00839635

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