, Zwiebel, References Accession no. References References Long- References References, Determinants of References References References Code S1 ? R script used for bottleneck simulations, 2006.
, Genetic drift, purifying selection and vector genotype shape
, omni <? ddply ( r e s u l t s 2 , . ( Statut , Sample ) , mutate , Sn . s i t e = ?( Frequency * log ( Frequency ) +(1?Frequency ) * log
, omni <? ddply ( r e s u l t s 2 , . ( Statut , Sample ) , mutate , Pi . s i t e =, ?(( Frequency ^2) + ( ( Frequency?1)^2) ) ) )
, Averaged Sn per s i t e over
, Averaged " , pi, paste ( " per sample" ) ) ) ) + xlab
, Averaged Sn per s i t e over
, Averaged " , pi, paste ( " per sample" ) ) ) ) + xlab
, Observed levels of DENV intra-host genetic diversity using the conservative marker set. (A) Proportion of variable sites detected. (B) Averaged Shannon entropy (S n ) per site over all positions per sample
, How important is vertical transmission in mosquitoes for the persistence of dengue? Insights from a mathematical model, Epidemics, vol.2, issue.1, pp.1-10, 2010.
DOI : 10.1016/j.epidem.2010.01.001
, Epidemic dynamics revealed in dengue evolution, Molecular biology and evolution, vol.27, issue.4, pp.811-818, 2010.
, The global distribution and burden of dengue, Nature, vol.62, issue.7446, pp.496504-507, 2013.
DOI : 10.1016/S0065-308X(05)62004-0
, Une hypothèse originale: la transmission transovarienne des arbovirus de Finlay à nos jours, Les sciences hors d'Occident au 20ème siècle, pp.83-88, 1996.
, Venezuelan equine encephalomyelitis in wild birds, American journal of hygiene, vol.63, issue.3, pp.261-273, 1956.
, Infec- References, 1956.
, Annales de l'Institut Pasteur, pp.1-25
, Fate of the Blood Meal in Force-Fed, Diapausing Culex pipiens (Diptera: Culicidae), Journal of Medical Entomology, vol.26, issue.4, pp.332-341, 1989.
DOI : 10.1093/jmedent/26.4.332
, Overwintering Biology of <I>Culex</I> (Diptera: Culicidae) Mosquitoes in the Sacramento Valley of California, Journal of Medical Entomology, vol.50, issue.4, pp.773-790, 2013.
DOI : 10.1603/ME12280
, The propagation of yellow fever; observations based on recent researches, Medical Record, vol.60, pp.201-209, 1901.
, Overwintering of arboviruses, Epidemiology and Control of Mosquito-borne Arboviruses in California, pp.357-382, 2004.
, Ecology of West Nile Virus in North America, Viruses, vol.74, issue.5, pp.2079-2105, 2013.
DOI : 10.3201/eid0901.020220
, Infection with chikungunya virus in Italy: an outbreak in a temperate region, The Lancet, vol.370, issue.9602, pp.3701840-1846, 2007.
DOI : 10.1016/S0140-6736(07)61779-6
, Experimental infection of fox squirrels, J. S, 2006.
, Further Observations on the Mechanism of Vertical Transmission of Flaviviruses by Aedes Mosquitoes, The American Journal of Tropical Medicine and Hygiene, vol.39, issue.1, pp.123-126, 1988.
DOI : 10.4269/ajtmh.1988.39.123
, Attemps to grow the yellow fever parasite -The hereditary transmission of the yellow fever parasite in the mosquito, 1906.
, A reliable data-based band- References Supporting information Table S1 ? Full list of studies included in databases 1, 2 and 3. References References References References Woodring 1998 Short report: Diapause, transovarial transmission, and filial infec- References References [Adams and Boots, 2010] Adams How important is vertical transmission in mosquitoes for the persistence of dengue? Insights from a mathematical model, Epidemics, vol.2, issue.1, pp.1-10, 1991.
, Evidence of experimental vertical transmission of emerging novel ECSA genotype of Chikungunya Virus in Aedes aegypti, PLoS neglected tropical diseases, vol.8, issue.7, p.2990, 2014.
, Miscellaneous Functions for "Grid" Graphics, 2015.
, Transovarial Transmission of Yellow Fever Virus in Stegomyia Mosquitoes *, The American Journal of Tropical Medicine and Hygiene, vol.29, issue.1, 1980.
DOI : 10.4269/ajtmh.1980.29.125
, Insect-Specific Flaviviruses: A Systematic Review of Their Discovery, Host Range, Mode of Transmission, Superinfection Exclusion Potential and Genomic Organization, Viruses, vol.25, issue.4, pp.1927-1959, 2015.
DOI : 10.1007/s00705-012-1240-z
, Variation in the Efficiency of Vertical Transmission of Dengue-1 Virus by Strains of Aedes albopictus (Diptera: Culicidae), Journal of Medical Entomology, vol.29, issue.6, pp.29985-989, 1992.
DOI : 10.1093/jmedent/29.6.985
, Recent Emergence of Dengue Virus Serotype 4 in French Polynesia Results from Multiple Introductions from Other South Pacific Islands, PLoS ONE, vol.9, issue.8, 2011.
DOI : 10.1371/journal.pone.0029555.t004
, The egg shell, The Biology of Mosquitoes, pp.63-73, 2000.
, The Biology of Mosquitoes, volume 3 of Transmissions of viruses and interactions with bacteria, 2012.
DOI : 10.1079/9781845932428.0000
, Intertwined arbovirus transmission activity: reassessing the transmission cycle paradigm, Frontiers in Physiology, vol.3, p.493, 2012.
DOI : 10.3389/fphys.2012.00493
URL : http://doi.org/10.3389/fphys.2012.00493
, Collinearity: a review of methods to deal with it and a simulation study evaluating their performance, Ecography, vol.1, issue.1, pp.27-46, 2013.
DOI : 10.1111/j.2041-210X.2009.00001.x
, Determinants of arbovirus vertical transmission in mosquitoes The Epidemiology and Evolution of Symbionts with Mixed-Mode Transmission, Annual Review of Ecology, Evolution , and Systematics, vol.44, issue.1, pp.623-643, 2013.
, Evolutionary Relationships Among California Serogroup Viruses (Bunyaviridae) and Aedes Mosquitoes (Diptera: Culicidae), Journal of Medical Entomology, vol.27, issue.5, pp.738-749, 1990.
DOI : 10.1093/jmedent/27.5.738
, VECTORS AND VERTICAL TRANSMISSION: AN EPIDEMIOLOGIC PERSPECTIVE, Annals of the New York Academy of Sciences, vol.182, issue.3, pp.173-194, 1975.
DOI : 10.1016/0022-2011(73)90141-9
, Data Analysis Using Regression and Multilevel/Hierarchical Models, 2015.
DOI : 10.1017/CBO9780511790942
, Simultaneous Inference in General Parametric Models, Biometrical Journal, vol.16, issue.3, pp.346-363, 2008.
DOI : 10.18637/jss.v016.i09
URL : http://citeseerx.ist.psu.edu/viewdoc/summary?doi=10.1.1.122.4411
, A Cophylogenetic Perspective of RNA-Virus Evolution, Molecular Biology and Evolution, vol.21, issue.1, pp.45-57, 2004.
DOI : 10.1093/molbev/msg232
, Persistence of dengue-3 virus through transovarial transmission passage in successive generations of Aedes aegypti mosquitoes., The American Journal of Tropical Medicine and Hygiene, vol.67, issue.2, pp.158-161, 2002.
DOI : 10.4269/ajtmh.2002.67.158
, Vector Competence of Alpine, Central Valley, and Coastal Mosquitoes (Diptera: Culicidae) from California for Jamestown Canyon Virus, Journal of Medical Entomology, vol.30, issue.2, pp.398-406, 1993.
DOI : 10.1093/jmedent/30.2.398
, Vector competence of selected mosquito species, 1993.
, Vector Competence of California Mosquitoes for California Encephalitis and California Encephalitis-Like Viruses, The American Journal of Tropical Medicine and Hygiene, vol.47, issue.5, pp.47562-573, 1992.
DOI : 10.4269/ajtmh.1992.47.562
, Vector competence of Aedes dorsalis (Diptera: Culicidae) from, 1998.
, for western equine encephalomyelitis virus, Journal of medical entomology, vol.35, issue.6, pp.1020-1024
, Transovarial Transmission of Arboviruses by Mosquitoes, References Vectors in virus biology, pp.63-91, 1984.
, Does transovarial transmission of dengue virus occur in Malaysian Aedes aegypti and Aedes albopictus? The Southeast Asian journal of tropical medicine and public health, pp.230-232, 1997.
, Vertical transmission of arboviruses in mosquitoes: a historical perspective. Infection, genetics and evolution : journal of molecular epidemiology and evolutionary genetics in infectious diseases, pp.681-690, 2014.
, The evolution of virulence in pathogens with vertical and horizontal transmission, Evolution, issue.5, pp.501729-1741, 1996.
, sjPlot: Data Visualization for, Statistics in Social Science, 2015.
, Pollen and Seed-Transmitted Viruses and Viroids, Annual Review of Phytopathology, vol.31, issue.1, pp.375-402, 1993.
DOI : 10.1146/annurev.py.31.090193.002111
, A Caution Regarding Rules of Thumb for Variance Inflation Factors, Quality & Quantity, vol.41, issue.5, pp.673-690, 2007.
, Overwintering of arboviruses, Epidemiology and Control of Mosquito-borne Arboviruses in California, pp.357-382, 2004.
, Further Observations on the Mechanism of Vertical Transmission of Flaviviruses by Aedes Mosquitoes, The American Journal of Tropical Medicine and Hygiene, vol.39, issue.1, pp.123-126, 1988.
DOI : 10.4269/ajtmh.1988.39.123
, Observed and projected climate shifts 1901-2100 depicted by world maps of the K?ppen-Geiger climate classification, Meteorologische Zeitschrift, vol.19, issue.2, pp.135-141, 2010.
DOI : 10.1127/0941-2948/2010/0430
, Evidence of efficient transovarial transmission of Culex flavivirus by Culex pipiens (Diptera: Culicidae), Journal of medical entomology, issue.5, pp.481031-1038, 2011.
, Vertical Maintenance of Dengue-1 Virus in Sequential Generations of Aedes-Albopictus, Journal of the American Mosquito Control Association, vol.6, issue.2, pp.312-314, 1990.
, Infection and dissemination of Venezuelan equine encephalitis virus in the epidemic mosquito vector, Aedes taeniorhynchus, American Journal of Tropical Medicine and Hygiene, vol.77, issue.1, pp.176-187, 2007.
, Experimental Studies on the Transovarial Transmission of Kunjin and San Angelo Viruses in Mosquitoes *, The American Journal of Tropical Medicine and Hygiene, vol.29, issue.4, pp.657-666, 1980.
DOI : 10.4269/ajtmh.1980.29.657
, Transovarial Transmission of Arboviruses in Their Invertebrate Vectors: Praeger. References Angel 2008b Distribution and seasonality of vertically transmitted dengue viruses in Aedes mosquitoes in arid and semi-arid areas of Rajasthan , India J Vector Borne Dis Natural Arunachalam 2002 Vertical transmission of Japanese encephalitis virus in Mansonia species, Current topics in vector research an epidemic-prone area of southern India Ann Trop Med Parasitol Natural References References References, pp.57-76, 1984.