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hal-01226411v1 Article dans une revue
Blaise Pichon, Florian Baret. Élites et agglomérations lémovices dans l’Antiquité : un état des lieux
Siècles, Centre d'Histoire "Espaces et Cultures", 2013, Élites et territoires, 38, <https://siecles.revues.org/2309>

hal-01110161v1 Article dans une revue
F. Jaziri, N. Parisot, A. Abid, J. Denonfoux, C. Ribiere et al. PhylOPDb: a 16S rRNA oligonucleotide probe database for prokaryotic identification
Database Searcher, Meckler Corp., 2014, 2014, pp.24771669. <10.1093/database/bau036>

hal-01110169v1 Article dans une revue
Faouzi Jaziri, Eric Peyretaillade, Mohieddine Missaoui, Nicolas Parisot, Sébastien Cipière et al. Large Scale Explorative Oligonucleotide Probe Selection for Thousands of Genetic Groups on a Computing Grid: Application to Phylogenetic Probe Design Using a Curated Small Subunit Ribosomal RNA Gene Database
TheScientificWorldJournal, TheScientificWorld, 2014, 2014, pp.24516366. <10.1155/2014/350487>

hal-01235538v1 Chapitre d'ouvrage
Fabien Joux, Jean Claude Bertrand, Rutger De Wit, Vincent Grossi, Laurent Intertaglia et al. Methods for Studying Microorganisms in the Environment
Environmental Microbiology: Fundamentals and Applications, Springer Netherlands, pp.757-829, 2014, 978-94-017-9117-5. <10.1007/978-94-017-9118-2_17>

hal-01309092v1 Article dans une revue
Faouzi Jaziri, Eric Peyretaillade, Mohieddine Missaoui, Nicolas Parisot, Sébastien Cipière et al. Research Article Large Scale Explorative Oligonucleotide Probe Selection for Thousands of Genetic Groups on a Computing Grid: Application to Phylogenetic Probe Design Using a Curated Small Subunit Ribosomal RNA Gene Database
The Scientific World Journal, Hindawi Publishing Corporation, 2014, 2014, pp.350487. <10.1155/2014/350487>

hal-01413017v1 Article dans une revue
Théodore Bouchez, A. L. Blieux, Samuel Dequiedt, Isabelle Domaizon, Alexis Dufresne et al. Molecular microbiology methods for environmental diagnosis
Environmental Chemistry Letters, Springer Verlag, 2016, 14 (4), pp.423--441. <10.1007/s10311-016-0581-3>

tel-00719613v1 Thèse
Emmanuel Scheubel. Predictive in vitro dissolution tools : application during formulation development
Pharmacology. Université d'Auvergne - Clermont-Ferrand I, 2010. English. <NNT : 2010CLF1PP04>

tel-00726333v1 Thèse
Marie Gérard-Champod. Caractérisation et modélisation in vitro de l'écosystème jéjuno-iléal du veau de boucherie
Alimentation et Nutrition. Université Blaise Pascal - Clermont-Ferrand II; Université d'Auvergne - Clermont-Ferrand I, 2009. Français. <NNT : 2009CLF1PP02>

tel-00726349v1 Thèse
Agnès Mihajlovski. Réévaluation de la biodiversité du microbiote méthanogène intestinal humain et influence de l'âge sur sa constitution
Microbiologie et Parasitologie. Université Blaise Pascal - Clermont-Ferrand II; Université d'Auvergne - Clermont-Ferrand I, 2009. Français. <NNT : 2009CLF1PP07>

hal-01352558v1 Article dans une revue
Patrice Baa-Puyoulet, Nicolas Parisot, Gérard Febvay, Jaime Huerta-Cepas, Augusto F Vellozo et al. ArthropodaCyc: a CycADS powered collection of BioCyc databases to analyse and compare metabolism of arthropods
Database - The journal of Biological Databases and Curation, Oxford University Press, 2016, <10.1093/database/baw081>

pasteur-01059404v1 Article dans une revue
Guillaume Borrel, Nicolas Parisot, Hugh Harris, Eric Peyretaillade, Nadia Gaci et al. Comparative genomics highlights the unique biology of Methanomassiliicoccales, a Thermoplasmatales-related seventh order of methanogenic archaea that encodes pyrrolysine.
BMC Genomics, BioMed Central, 2014, 15 (1), pp.679. <10.1186/1471-2164-15-679>

hal-00806709v1 Article dans une revue
Cécile Lepère, Isabelle Domaizon, Najwa Taïb, Jean-François Mangot, Gisèle Bronner et al. Geographic distance and ecosystem size determine the distribution of smallest protists in lacustrine ecosystems.
FEMS Microbiology Ecology, Wiley-Blackwell, 2013, epub ahead of print. <10.1111/1574-6941.12100>

hal-00814808v1 Article dans une revue
Eric Peyretaillade, Hicham El Alaoui, Marie Diogon, Valérie Polonais, Nicolas Parisot et al. Extreme reduction and compaction of microsporidian genomes.
Research in Microbiology, Elsevier, 2011, 162 (6), pp.598-606. <10.1016/j.resmic.2011.03.004>

hal-01481304v1 Article dans une revue
Magali Ranchou-Peyruse, Cyrielle Gasc, Marion Guignard, Thomas Auello, David Dequidt et al. The sequence capture by hybridization: a new approach for revealing the potential of mono-aromatic hydrocarbons bioattenuation in a deep oligotrophic aquifer.
Microbial biotechnology, 2017, 10, pp.469-479. <10.1111/1751-7915.12426>

hal-01110134v1 Article dans une revue
E Peyretaillade, D Boucher, N Parisot, C Gasc, R Butler et al. Exploiting the architecture and the features of the microsporidian genomes to investigate diversity and impact of these parasites on ecosystems
Heredity, Nature Publishing Group, 2014, pp.25182222. <10.1038/hdy.2014.78>

hal-01449140v1 Article dans une revue
C. Gasc, C. Ribière, N. Parisot, R. Beugnot, C. Defois et al. Capturing prokaryotic dark matter genomes
Research in Microbiology, Elsevier, 2015, 166 (10), pp.814-830. <10.1016/j.resmic.2015.06.001>

hal-00813939v1 Article dans une revue
Eric Peyretaillade, Nicolas Parisot, Valérie Polonais, Sébastien Terrat, Jérémie Denonfoux et al. Annotation of microsporidian genomes using transcriptional signals.
Nature Communications, Nature Publishing Group, 2012, 3, pp.1137. <10.1038/ncomms2156>

hal-01388523v1 Article dans une revue
Pierre Simonet, Karen Gaget, Nicolas Parisot, Gabrielle Duport, Marjolaine Rey et al. Disruption of phenylalanine hydroxylase reduces adult lifespan and fecundity, and impairs embryonic development in parthenogenetic pea aphids
Scientific Reports, Nature Publishing Group, 2016, 6, <10.1038/srep34321>

hal-00783545v1 Article dans une revue
Jérémie Denonfoux, Nicolas Parisot, Eric Dugat-Bony, Corinne Petit, Delphine Boucher et al. Gene Capture Coupled to High-Throughput Sequencing as a Strategy for Targeted Metagenome Exploration
DNA Research, Oxford University Press (OUP), 2013, pp. 1-12. <10.1093/dnares/dst001>

hal-01082838v1 Article dans une revue
Xiaoyu Xie, Jean-Michel Cardot, Ghislain Garrait, Vincent Thery, Mohamed El-Hajji et al. Micelle dynamic simulation and physicochemical characterization of biorelevant media to reflect gastrointestinal environment in fasted and fed states
European Journal of Pharmaceutics and Biopharmaceutics, Elsevier, 2014, 88, pp.565-573. <10.1016/j.ejpb.2014.05.020>

hal-00842871v1 Article dans une revue
Corinne Biderre-Petit, Didier Jézéquel, Eric Dugat-Bony, Filipa Lopes, Jan Kuever et al. Identification of microbial communities involved in the methane cycle of a freshwater meromictic lake.
FEMS Microbiology Ecology, Wiley-Blackwell, 2011, 77 (3), pp.533-45. <10.1111/j.1574-6941.2011.01134.x>

hal-00529610v1 Article dans une revue
Jean-François Brugere, Agnès Mihajlovski, Mohieddine Missaoui, Pierre Peyret. Tools for stools: the challenge of assessing human intestinal microbiota using molecular diagnostics
Expert Review of Molecular Diagnostics, Expert Reviews (formerly Future Drugs), 2009, 9 (4), pp.353-65. <10.1586/erm.09.16>

hal-01130687v1 Article dans une revue
Esko Oksanen, Matthew P Blakeley, Mohamed El-Hajji, Ulf Ryde, Monika Budayova-Spano. The neutron structure of urate oxidase resolves a long-standing mechanistic conundrum and reveals unexpected changes in protonation.
PLoS ONE, Public Library of Science, 2013, 9 (1), pp.e86651

hal-01053924v1 Article dans une revue
Johan Panek, Hicham El Alaoui, Anne Mone, Serge Urbach, Edith Demettre et al. Hijacking of Host Cellular Functions by an Intracellular Parasite, the Microsporidian Anncaliia algerae.
PLoS ONE, Public Library of Science, 2014, 9 (6), pp.e100791. <10.1371/journal.pone.0100791>

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