A comprehensive gene expression atlas of sex-and tissue-specificity in the malaria vector, Anopheles gambiae, BMC Genomics, vol.12, p.296, 2011. ,
Immune factor Gambif1, a new rel family member from the human malaria vector, Anopheles gambiae, EMBO J, vol.15, pp.4691-4701, 1996. ,
Controlling the false discovery ratea practical and powerful approach to multiple testing, J. R. Stat. Soc., B, vol.57, pp.289-300, 1995. ,
Genome analysis of vectorial capacity in major Anopheles vectors of malaria parasites, Anopheles Genomes Cluster Committee, 2008. ,
Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios, Science, vol.302, pp.1960-1963, 2003. ,
SNP discovery and molecular evolution in Anopheles gambiae, with special emphasis on innate immune system, BMC Genomics, vol.9, p.227, 2008. ,
Chromosomal differentiation and adaptation to human environments in the Anopheles gambiae complex, Trans. R. Soc. Trop. Med. Hyg, vol.73, pp.483-497, 1979. ,
Living at the edge: biogeographic patterns of habitat segregation conform to speciation by niche expansion in Anopheles gambiae, BMC Ecol, vol.9, p.16, 2009. ,
The demographic histories of the M and S molecular forms of Anopheles gambiae s.s, Mol. Biol. Evol, vol.27, pp.1739-1744, 2010. ,
The Toll and Imd pathways are the major regulators of the immune response in Drosophila, EMBO J, vol.21, pp.2568-2579, 2002. ,
Molecular evidence of incipient speciation within Anopheles gambiae s.s. in West Africa, Insect Mol. Biol, vol.10, pp.9-18, 2001. ,
Speciation within Anopheles gambiae-the glass is half full, Science, vol.298, pp.115-117, 2002. ,
, Selection on A. gambiae Immune Genes | 1517, vol.2, 2012.
Evaluating the effect of postmating isolation between molecular forms of Anopheles gambiae (Diptera: Culicidae), J. Med. Entomol, vol.44, pp.60-64, 2007. ,
Evidence for divergent selection between the molecular forms of Anopheles gambiae: role of predation, BMC Evol. Biol, vol.8, p.5, 2008. ,
Anopheles fibrinogen-related proteins provide expanded pattern recognition capacity against bacteria and malaria parasites, J. Biol. Chem, vol.284, pp.9835-9844, 2009. ,
Anopheles gambiae immune responses to human and rodent Plasmodium parasite species, PLoS Pathog, vol.2, p.52, 2006. ,
Implication of the mosquito midgut microbiota in the defense against malaria parasites, PLoS Pathog, vol.5, p.1000423, 2009. ,
Three novel mammalian toll-like receptors: gene structure, expression, and evolution. Eur. Cytokine Netw, vol.11, pp.362-371, 2000. ,
Molecular characterization of ribosomal DNA polymorphisms discriminating among chromosomal forms of Anopheles gambiae s.s, Insect Mol. Biol, vol.10, pp.19-23, 2001. ,
Hitchhiking under positive Darwinian selection, Genetics, vol.155, pp.1405-1413, 2000. ,
Identifying the most productive breeding sites for malaria mosquitoes in The Gambia, Malar. J, vol.8, p.62, 2009. ,
2010 seqphase: a web tool for interconverting phase input/output files and fasta sequence alignments, Mol. Ecol. Resour, vol.10, pp.162-166 ,
Two mosquito LRR proteins function as complement control factors in the TEP1-mediated killing of Plasmodium, Cell Host Microbe, vol.5, pp.273-284, 2009. ,
Boosting NF-kappaB-dependent basal immunity of Anopheles gambiae aborts development of Plasmodium berghei, Immunity, vol.25, pp.677-685, 2006. ,
NF-kappa B and Rel proteins: evolutionarily conserved mediators of immune responses, Annu. Rev. Immunol, vol.16, pp.225-260, 1998. ,
A behavioral mechanism underlying ecological divergence in the malaria mosquito Anopheles gambiae, Behav. Ecol, vol.21, pp.1087-1092, 2010. ,
Behavioural responses of Anopheles gambiae sensu stricto M and S molecular form larvae to an aquatic predator in Burkina Faso, Parasites Vectors, vol.5, p.65, 2012. ,
Horseshoe crab acetyl group-recognizing lectins involved in innate immunity are structurally related to fibrinogen, Proc. Natl. Acad. Sci, vol.96, pp.10086-10091, 1999. ,
Disease and evolution, La Ricerca Scientifica Supplemento A, vol.19, pp.68-76, 1949. ,
Generating samples under a Wright-Fisher neutral model of genetic variation, Bioinformatics, vol.18, pp.337-338, 2002. ,
A test of neutral molecular evolution based on nucleotide data, Genetics, vol.116, pp.153-159, 1987. ,
DNA variation at the Sod locus of Drosophila melanogaster: an unfolding story of natural selection, Proc. Natl. Acad. Sci. USA, vol.94, pp.7725-7729, 1997. ,
Toll receptors in innate immunity, Trends Cell Biol, vol.11, pp.304-311, 2001. ,
Biology of Toll receptors: lessons from insects and mammals, J. Leukoc. Biol, vol.75, pp.18-26, 2004. ,
Evolutionary genetics of invasive species, Trends Ecol. Evol, vol.17, pp.386-391, 2002. ,
The molecular forms of Anopheles gambiae: a phenotypic perspective, Infect. Genet. Evol, vol.8, pp.737-746, 2008. ,
Functional analysis and regulation of nuclear import of dorsal during the immune response in Drosophila, EMBO J, vol.14, pp.536-545, 1995. ,
Fast and accurate short read alignment with Burrows-Wheeler transform, Bioinformatics, vol.25, pp.1754-1760, 2009. ,
The Sequence Alignment/Map format and SAMtools, Bioinformatics, vol.25, pp.2078-2079, 2009. ,
DnaSP v5: a software for comprehensive analysis of DNA polymorphism data, Bioinformatics, vol.25, pp.1451-1452, 2009. ,
Characterization of four Toll related genes during development and immune responses in Anopheles gambiae, Insect Biochem. Mol. Biol, vol.32, pp.1171-1179, 2002. ,
Microarray analysis of genes showing variable expression following a blood meal in Anopheles gambiae, Insect Mol. Biol, vol.14, pp.365-373, 2005. ,
Asymmetric introgression between the M and S forms of the malaria vector, Anopheles gambiae, maintains divergence despite extensive hybridization, Mol. Ecol, vol.20, pp.4983-4994, 2011. ,
The hitch-hiking effect of a favourable gene, Genet. Res, vol.23, pp.23-35, 1974. ,
The biology of Toll-like receptors, Cytokine Growth Factor Rev, vol.11, pp.219-232, 2000. ,
Immune signaling pathways regulating bacterial and malaria parasite infection of the mosquito Anopheles gambiae, Proc. Natl. Acad. Sci. USA, vol.102, pp.11420-11425, 2005. ,
Anopheles gambiae PGRPLC-mediated defense against bacteria modulates infections with malaria parasites, PLoS Pathog, vol.5, p.1000542, 2009. ,
Quantitative trait loci controlling refractoriness to Plasmodium falciparum in natural Anopheles gambiae mosquitoes from a malariaendemic region in western Kenya, Genetics, vol.173, pp.235-241, 2006. ,
Anopheles gambiae pathogen susceptibility: the intersection of genetics, immunity and ecology, Curr. Opin. Microbiol, vol.15, pp.285-291, 2012. ,
URL : https://hal.archives-ouvertes.fr/pasteur-02008330
Fine pathogen discrimination within the APL1 gene family protects Anopheles gambiae against human and rodent malaria species, PLoS Pathog, vol.5, p.1000576, 2009. ,
, Dynamics of transmission of Plasmodium falciparum by Anopheles arabiensis and the molecular forms M and S of Anopheles gambiae in Dielmo, vol.7, p.136, 2008.
SNP genotyping defines complex gene-flow boundaries among African malaria vector mosquitoes, Science, vol.330, pp.514-517, 2010. ,
The salivary transcriptome of Anopheles gambiae (Diptera: Culicidae) larvae: a microarray-based analysis, Insect Biochem. Mol. Biol, vol.39, pp.382-394, 2009. ,
Genetic loci affecting resistance to human malaria parasites in a West African mosquito vector population, Science, vol.298, pp.213-216, 2002. ,
A scan for positively selected genes in the genomes of humans and chimpanzees, PLoS Biol, vol.3, p.170, 2005. ,
Population genetics of Plasmodium resistance genes in Anopheles gambiae: no evidence for strong selection, Mol. Ecol, vol.16, pp.3497-3510, 2007. ,
The evolution of TEP1, an exceptionally polymorphic immunity gene in Anopheles gambiae, BMC Evol. Biol, vol.8, p.274, 2008. ,
Inferring selection in the Anopheles gambiae species complex: an example from immune-related serine protease inhibitors, Malar. J, vol.8, p.117, 2009. ,
High levels of hybridization between molecular forms of Anopheles gambiae from Guinea Bissau, J. Med. Entomol, vol.45, pp.1057-1063, 2008. ,
Leucine-rich repeat protein complex activates mosquito complement in defense against Plasmodium parasites, Science, vol.324, pp.258-261, 2009. ,
Population structure, speciation, and introgression in the Anopheles gambiae complex, Parassitologia, vol.41, pp.101-113, 1999. ,
Inference of population structure using multilocus genotype data, Genetics, vol.155, pp.945-959, 2000. ,
The genetics of human adaptation: hard sweeps, soft sweeps, and polygenic adaptation, Curr. Biol, vol.20, pp.208-215, 2010. ,
DOI : 10.1016/j.cub.2009.11.055
URL : https://doi.org/10.1016/j.cub.2009.11.055
The signature of positive selection on standing genetic variation, Evolution, vol.59, pp.2312-2323, 2005. ,
, R: A language and Environment for Statistical Computing. R Development Core Team, 2011.
Natural malaria infection in Anopheles gambiae is regulated by a single genomic control region, Science, vol.312, pp.577-579, 2006. ,
A major genetic locus controlling natural Plasmodium falciparum infection is shared by East and West African Anopheles gambiae, Malar. J, vol.6, p.87, 2007. ,
DOI : 10.1186/1475-2875-6-87
URL : https://malariajournal.biomedcentral.com/track/pdf/10.1186/1475-2875-6-87
A cryptic subgroup of Anopheles gambiae is highly susceptible to human malaria parasites, Science, vol.331, pp.596-598, 2011. ,
URL : https://hal.archives-ouvertes.fr/pasteur-01971785
Exceptional diversity, maintenance of polymorphism, and recent directional selection on the APL1 malaria resistance genes of Anopheles gambiae, PLoS Biol, vol.9, p.1000600, 2011. ,
URL : https://hal.archives-ouvertes.fr/pasteur-02008334
Dynamic evolution of the innate immune system in Drosophila, Nat. Genet, vol.39, pp.1461-1468, 2007. ,
Insertion polymorphisms of SINE200 retrotransposons within speciation islands of Anopheles gambiae molecular forms, Malar. J, vol.7, p.163, 2008. ,
Natural selection drives Drosophila immune system evolution, Genetics, vol.164, pp.1471-1480, 2003. ,
LDheatmap: an R runction for graphical display of pairwise linkage disequilibria between single nucleotide polymorphisms, J. Stat. Softw, vol.16, 2006. ,
Ecological niche partitioning between Anopheles gambiae molecular forms in Cameroon: the ecological side of speciation, BMC Ecol, vol.9, p.17, 2009. ,
Patterns of selection in anti-malarial immune genes in malaria vectors: evidence for adaptive evolution in LRIM1 in Anopheles arabiensis, PLoS ONE, vol.2, p.793, 2007. ,
A new statistical method for haplotype reconstruction from population data, Am. J. Hum. Genet, vol.68, pp.978-989, 2001. ,
DOI : 10.1086/319501
URL : https://doi.org/10.1086/319501
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism, Genetics, vol.123, pp.585-595, 1989. ,
MEGA5: molecular evolutionary genetics analysis using maximum likelihood, evolutionary distance, and maximum parsimony methods, Mol. Biol. Evol, vol.28, pp.2731-2739, 2011. ,
DOI : 10.1093/molbev/msr121
URL : https://academic.oup.com/mbe/article-pdf/28/10/2731/2954190/msr121.pdf
Molecular evolution of plant immune system genes, Trends Genet, vol.22, pp.662-670, 2006. ,
Differential Plasmodium falciparum infection of Anopheles gambiae s.s. molecular and chromosomal forms in Mali, Malar. J, vol.11, p.133, 2012. ,
A comparison of estimators of the population recombination rate, Mol. Biol. Evol, vol.17, pp.156-163, 2000. ,
Evolutionary dynamics of immune-related genes and pathways in disease-vector mosquitoes, Science, vol.316, pp.1738-1743, 2007. ,
Sequencestructure-function relations of the mosquito leucine-rich repeat immune proteins, BMC Genomics, vol.11, p.531, 2010. ,
On the number of segregating sites in genetical models without recombination, Theor. Popul. Biol, vol.7, pp.256-276, 1975. ,
The homozygosity test of neutrality, Genetics, vol.88, pp.405-417, 1978. ,
Estimating f-statistics for the analysis of population-structure, Evolution, vol.38, pp.1358-1370, 1984. ,
Molecular karyotyping of the 2La inversion in Anopheles gambiae, Am. J. Trop. Med. Hyg, vol.76, pp.334-339, 2007. ,
Adaptive divergence between incipient species of Anopheles gambiae increases resistance to Plasmodium, Proc. Natl. Acad. Sci. USA, vol.108, pp.244-249, 2011. ,
Species and populations of the Anopheles gambiae complex in Cameroon with special emphasis on chromosomal and molecular forms of Anopheles gambiae s.s, J. Med. Entomol, vol.42, pp.998-1005, 2005. ,
Statistical tests for detecting positive selection by utilizing high-frequency variants, Genetics, vol.174, pp.1431-1439, 2006. ,
Comparisons of site-and haplotype-frequency methods for detecting positive selection, Mol. Biol. Evol, vol.24, pp.1562-1574, 2007. ,
Compound tests for the detection of hitchhiking under positive selection, Mol. Biol. Evol, vol.24, pp.1898-1908, 2007. ,