ProFeatMap: a customizable tool for 2D feature representation of protein sets

G. Bich (1) , E. Monsellier (1) , G. Travé (1) , Y. Nominé (1)

1 IGBMC - Institut de Génétique et de Biologie Moléculaire et Cellulaire

ABSTRACT Summary Here, we present ProFeatMap, an intuitive Python-based website allowing to quickly display protein features such as domains, repeats, post-translational modifications location and so forth, into a highly customizable graphical 2D map. Starting from a user-defined protein list, ProFeatMap automatically extracts the main protein features from the Uniprot database. The resulting high-quality maps can help to gain insights, e.g. feature redundancy, that were previously overlooked but which may be useful for the research project. ProFeatMap is freely accessible on the web at: https://profeatmap.pythonanywhere.com/ Availability Source code is freely accessible at https://github.com/profeatmap/ProFeatMap under the GPL license. Contact [e-mail] , [e-mail] Supplementary information detailed user guide of ProFeatMap

Domaines: Biochimie [q-bio.BM]; Biophysique

G. Bich, E. Monsellier, G. Travé, Y. Nominé. ProFeatMap: a customizable tool for 2D feature representation of protein sets. 2022. ⟨hal-03843030⟩