RACINE2.2 : a software application for processing and mapping spatial distribution of root length density and potential root extraction ratio from root counts on trench profiles - Archive ouverte HAL Accéder directement au contenu
Chapitre D'ouvrage Année : 2022

RACINE2.2 : a software application for processing and mapping spatial distribution of root length density and potential root extraction ratio from root counts on trench profiles

A. Faye
  • Fonction : Auteur
B. Sine
  • Fonction : Auteur
J.L. Chopart
  • Fonction : Auteur

Résumé

A method has been developed to measure root intersection density (RID) on a trench-profile in field conditions. Here we describe how 2D spatial distribution mapping of RID can be processed and converted into root length density (RLD) and root distances (ARD) using a new freeware named RACINE2.2. The software also allows a simple modeling of potential root extraction ratio in the soil (PRER). The software contains models calculating RLD, ARD, and PRER from RID for several crops (maize, sorghum, sugarcane, rice, pearl millet, pineapple, eucalyptus). Models may be changed or added into RACINE2.2. RLD, ARD, and PRER are calculated for each spatial unit and can be used to generate 2D maps using RACINE2.2. Data can be exported to a spreadsheet or a surface mapping software for further analysis. It is also possible to import data into RACINE2.2 from a spreadsheet. This application thus makes studies about root-soil interactions, root growth, and root uptake easier. It opens new avenues to characterize root systems to improve root water and nutrient uptake in field conditions.
Fichier non déposé

Dates et versions

hal-03637555 , version 1 (11-04-2022)

Identifiants

Citer

A. Faye, Laurent Laplaze, B. Sine, J.L. Chopart. RACINE2.2 : a software application for processing and mapping spatial distribution of root length density and potential root extraction ratio from root counts on trench profiles. Lucas, Mikaël (ed.). Plant systems biology : methods and protocols, 2395, Springer, pp.247-258, 2022, Methods in Molecular Biology, 9781071618141. ⟨10.1007/978-1-0716-1816-5_12⟩. ⟨hal-03637555⟩
18 Consultations
0 Téléchargements

Altmetric

Partager

Gmail Facebook X LinkedIn More