, study of two stream invertebrates with differing dispersal abilities, Freshwater Biology, vol.57, pp.969-981
Diversity in riverine metacommunities: A network perspective, Aquatic Ecology, vol.47, pp.365-377, 2013. ,
Fragmentation of Andes-to-Amazon connectivity by hydropower dams, Science Advances, vol.4, p.1642, 2018. ,
Is hatchery stocking a help or harm?, Aquaculture, vol.308, pp.2-11, 2010. ,
Marxan and relatives: Software for spatial conservation prioritisation, Spatial conservation prioritisation : Quantitative methods and computational tools, pp.185-195, 2009. ,
Local adaptation in Trinidadian guppies alters ecosystem processes, Proceedings of the National Academy of Sciences, vol.107, pp.3616-3621, 2010. ,
Approximate Bayesian computation in population genetics, Genetics, vol.162, pp.2025-2035, 2002. ,
Ecological speciation in the tropics: Insights from comparative genetic studies in Amazonia, Frontiers in Genetics, vol.5, 2015. ,
The network dynamics hypothesis: How channel networks structure riverine habitats, BioScience, vol.54, p.413, 2004. ,
, Editorial. Evolutionary Applications, vol.1, pp.1-2, 2008.
Genetic effects of habitat fragmentation on blue sucker populations in the upper Missouri River, Conservation Genetics, vol.9, pp.821-832, 1918. ,
Regional vs local drivers of phylogenetic and species diversity in stream fish communities, Freshwater Biology, vol.59, pp.450-462, 2014. ,
Time to go bigger: Emerging patterns in macrogenetics, Trends in Genetics, vol.33, pp.579-580, 2017. ,
Speciesspecific responses to landscape fragmentation: Implications for management strategies, Evolutionary Applications, vol.3, pp.291-304, 2010. ,
URL : https://hal.archives-ouvertes.fr/hal-01219020
On the roles of landscape heterogeneity and environmental variation in determining population genomic structure in a dendritic system, Molecular Ecology, vol.27, pp.3484-3497, 2018. ,
Random forests, Machine Learning, vol.45, pp.5-32, 2001. ,
Dendritic network structure constrains metacommunity properties in riverine ecosystems, Journal of Animal Ecology, vol.79, pp.571-580, 2010. ,
Allelic diversity and its implications for the rate of adaptation, Genetics, vol.195, pp.1373-1384, 2013. ,
Living in the branches: Population dynamics and ecological processes in dendritic networks, Ecology Letters, vol.10, pp.165-175, 2007. ,
Biodiversity loss and its impact on humanity, Nature, vol.486, pp.59-67, 2012. ,
Dendritic connectivity controls biodiversity patterns in experimental metacommunities, Proceedings of the National Academy of Sciences, vol.109, pp.5761-5766, 2012. ,
Genes on the edge: A framework to detect genetic diversity imperiled by climate change, Global Change Biology, vol.25, pp.4034-4047, 2019. ,
Spatial conservation prioritization of biodiversity spanning the evolutionary continuum, Nature Ecology & Evolution, vol.1, p.151, 2017. ,
Modelling the effect of in-stream and overland dispersal on gene flow in river networks, Ecological Modelling, vol.220, pp.3589-3598, 2009. ,
URL : https://hal.archives-ouvertes.fr/hal-00735519
In-stream and overland dispersal across a river network influences gene flow in a freshwater insect, Calopteryx splendens, Molecular Ecology, vol.17, pp.3496-3505, 2008. ,
The problem of pattern and scale in ecology: What have we learned in 20 years?, Ecology Letters, vol.16, pp.4-16, 2013. ,
A single generation of domestication heritably alters the expression of hundreds of genes, Nature Communications, vol.7, p.10676, 2016. ,
Global proliferation of small hydropower plants-Science and policy, Frontiers in Ecology and the Environment, vol.16, pp.91-100, 2018. ,
The relative influence of natural selection and geography on gene flow in guppies, Molecular Ecology, vol.15, pp.49-62, 2005. ,
abc: An R package for approximate Bayesian computation (ABC): R package: abc, Methods in Ecology and Evolution, vol.3, pp.475-479, 2012. ,
Historical process lead to false genetic signal of current connectivity among populations, Genetica, vol.139, pp.1417-1428, 2012. ,
Human predators outpace other agents of trait change in the wild, Proceedings of the National Academy of Sciences, vol.106, pp.952-954, 2009. ,
Challenges, developments and perspectives in intermittent river ecology, Freshwater Biology, vol.61, pp.1171-1180, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-02604739
A cost-and-time effective procedure to develop SNP markers for multiple species: A support for community genetics, Methods in Ecology and Evolution, vol.9, pp.1959-1974, 2018. ,
URL : https://hal.archives-ouvertes.fr/hal-01837864
Global imprint of historical connectivity on freshwater fish biodiversity, Ecology Letters, vol.17, pp.1130-1140, 2014. ,
Functional traits, the phylogeny of function, and ecosystem service vulnerability, Ecology and Evolution, vol.3, pp.2958-2975, 2013. ,
Patterns of genetic variation in anthropogenically impacted populations, Conservation Genetics, vol.9, pp.141-156, 2008. ,
Planning for optimal conservation of geographical genetic variability within species, Conservation Genetics, vol.13, pp.1085-1093, 2012. ,
Estimating intraspecific genetic diversity from community DNA metabarcoding data, PeerJ, vol.6, p.4644, 2018. ,
Intraspecific phenotypic differences in fish affect ecosystem processes as much as bottom-up factors, Oikos, vol.124, pp.1181-1191, 2015. ,
Connectivity, fragmentation, and extinction risk in dendritic metapopulations, Ecology, vol.83, pp.3243-3249, 2002. ,
Epigenetics and the environment: Emerging patterns and implications, Nature Reviews Genetics, vol.13, pp.97-109, 2012. ,
URL : https://hal.archives-ouvertes.fr/hal-02193314
Small but mighty: Headwaters are vital to stream network biodiversity at two levels of organization, Journal of the North American Benthological Society, vol.30, pp.963-980, 2011. ,
Improving plant allometry by fusing forest models and remote sensing, New Phytologist, vol.223, pp.1159-1165, 2019. ,
URL : https://hal.archives-ouvertes.fr/hal-02191073
Inter-individual variation promotes ecological success of populations and species: Evidence from experimental and comparative studies, Ecography, vol.39, pp.630-648, 2016. ,
Lessons from the fish: A multi-species analysis reveals common processes underlying similar species-genetic diversity correlations, Freshwater Biology, vol.61, pp.1830-1845, 2016. ,
URL : https://hal.archives-ouvertes.fr/hal-01444024
Intraspecific genetic and phenotypic diversity: Parallel processes and correlated patterns?, 2018. ,
,
Inferring causalities in landscape genetics: An extension of Wright's causal modeling to distance matrices, The American Naturalist, vol.191, pp.491-508, 2018. ,
URL : https://hal.archives-ouvertes.fr/hal-01732611
Genetic rescue of small inbred populations: Metaanalysis reveals large and consistent benefits of gene flow, Molecular Ecology, vol.24, pp.2610-2618, 2015. ,
Introduction to conservation genetics, 2002. ,
Adaptive evolutionary conservation: Towards a unified concept for defining conservation units, Molecular Ecology, vol.10, pp.2741-2752, 2001. ,
Consequences of unequal population size, asymmetric gene flow and sex-biased dispersal on population structure in brook charr (Salvelinus fontinalis), Molecular Ecology, vol.13, pp.67-80, 2004. ,
Classical metapopulation dynamics and eco-evolutionary feedbacks in dendritic networks, Ecography, vol.40, pp.1455-1466, 2017. ,
Harnessing genomics for delineating conservation units, Trends in Ecology & Evolution, vol.27, pp.489-496, 2012. ,
Diversity from genes to ecosystems: A unifying framework to study variation across biological metrics and scales, Evolutionary Applications, vol.11, pp.1176-1193, 2018. ,
Global patterns in biodiversity, Nature, vol.405, pp.220-227, 2000. ,
Intraspecific differences in behaviour and physiology: Effects of captive breeding on patterns of torpor in feathertail gliders, Journal of Comparative Physiology B: Biochemical, Systemic, and Environmental Physiology, vol.171, pp.569-576, 2001. ,
Patterns and causes of species richness: A general simulation model for macroecology, Ecology Letters, vol.12, pp.873-886, 2009. ,
Structural equation modelling and natural systems, 2006. ,
Aquatic landscape genomics and environmental effects on genetic variation, Trends in Ecology & Evolution, vol.34, pp.641-654, 2019. ,
Metaanalysis and the science of research synthesis, Nature, vol.555, pp.175-182, 2018. ,
The relevance of time series in molecular ecology and conservation biology: Temporal comparison of genetic data, Biological Reviews, vol.89, pp.484-492, 2014. ,
Concordant genetic estimators of migration reveal anthropogenically enhanced source-sink population structure in the River Sculpin, Cottus gobio. Genetics, vol.173, pp.1487-1501, 2006. ,
Sixty years of anthropogenic pressure: A spatio-temporal genetic analysis of brown trout populations subject to stocking and population declines, Molecular Ecology, vol.18, pp.2549-2562, 2009. ,
Environmental and geographic variables are effective surrogates for genetic variation in conservation planning, Proceedings of the National Academy of Sciences, vol.114, pp.12755-12760, 2017. ,
Evolutionary diversification in stickleback affects ecosystem functioning, Nature, vol.458, pp.1167-1170, 2009. ,
A critique for eco-evolutionary dynamics, Functional Ecology, vol.33, pp.84-94, 2019. ,
Species distributions represent intraspecific genetic diversity of freshwater fish in conservation assessments, Freshwater Biology, vol.61, pp.1707-1719, 2016. ,
Addressing longitudinal connectivity in the systematic conservation planning of fresh waters, Freshwater Biology, vol.56, pp.57-70, 2011. ,
Prioritizing refugia for freshwater biodiversity conservation in highly seasonal ecosystems, Diversity and Distributions, vol.19, pp.1031-1042, 2013. ,
Comparative evaluation of potential indicators and temporal sampling protocols for monitoring genetic erosion, Evolutionary Applications, vol.7, pp.984-998, 2014. ,
Computer simulations: Tools for population and evolutionary genetics, Nature Reviews Genetics, vol.13, pp.110-122, 2012. ,
Patterns of population genetic diversity in riparian and aquatic plant species along rivers: Plant genetic diversity along rivers, Journal of Biogeography, vol.37, pp.1730-1739, 2010. ,
Effects of biodiversity on ecosystem functioning: A consensus of current knowledge, Ecological Monographs, vol.75, pp.3-35, 2005. ,
URL : https://hal.archives-ouvertes.fr/hal-00188090
Ecological consequences of genetic diversity: Ecological effects of genetic diversity, Ecology Letters, vol.11, pp.609-623, 2008. ,
Genes in Streams: Using DNA to understand the movement of freshwater fauna and their riverine habitat, BioScience, vol.59, pp.573-583, 2009. ,
Next-generation conservation genetics and biodiversity monitoring, Evolutionary Applications, vol.11, pp.1029-1034, 2018. ,
Inferring landscape effects on dispersal from genetic distances: How far can we go?, Molecular Ecology, vol.20, pp.692-705, 2011. ,
Gene flow in an endangered willow Salix hukaoana (Salicaceae) in natural and fragmented riparian landscapes, Conservation Genetics, vol.12, pp.79-89, 2009. ,
Linking dendritic network structures to population demogenetics: The downside of connectivity, Oikos, vol.117, pp.1479-1490, 2008. ,
URL : https://hal.archives-ouvertes.fr/hal-02666231
Quantifying the lag time to detect barriers in landscape genetics, Molecular Ecology, vol.19, pp.4179-4191, 2010. ,
Combining demographic and genetic factors to assess population vulnerability in stream species, Ecological Applications, vol.24, pp.1505-1524, 2014. ,
, Patterns in ecology. Oikos, 75, p.145, 1996.
Intraspecific variability in leaf traits strongly affects alder leaf decomposition in a stream, Basic and Applied Ecology, vol.84, pp.598-605, 1999. ,
Estimated six per cent loss of genetic variation in wild populations since the industrial revolution, Evolutionary Applications, vol.12, pp.1505-1512, 2019. ,
Impact of genomic diversity in river ecosystems, Trends in Plant Science, vol.19, pp.361-366, 2014. ,
Fast sequence-based microsatellite genotyping development workflow, 2019. ,
URL : https://hal.archives-ouvertes.fr/hal-02791502
The problem of pattern and scale in ecology, Ecology, vol.73, pp.1943-1967, 1992. ,
Toward process-based conservation prioritizations for freshwater ecosystems. Aquatic Conservation: Marine and Freshwater Ecosystems, vol.29, pp.1149-1160, 2019. ,
High genetic diversity and no inbreeding in the endangered copper redhorse, Moxostoma hubbsi (Catostomidae, Pisces): The positive sides of a long generation time, Molecular Ecology, vol.15, pp.1769-1780, 2006. ,
Parameter identifiability, constraint, and equifinality in data assimilation with ecosystem models, Ecological Applications, vol.19, pp.571-574, 2009. ,
Adaptation to natural flow regimes, Trends in Ecology & Evolution, vol.19, pp.94-100, 2004. ,
Geographical ecology: Patterns in the distribution of species, 1984. ,
Systematic conservation planning, Nature, vol.405, pp.243-253, 2000. ,
Demographic and genetic collapses in spatially structured populations: Insights from a long-term survey in wild fish metapopulations, Oikos, vol.128, pp.196-207, 2019. ,
Experimental evidence of an eco-evolutionary feedback during adaptive divergence, Current Biology, vol.26, pp.483-489, 2016. ,
Toward an integration of evolutionary biology and ecosystem science: Integration of evolutionary biology and ecosystem science, Ecology Letters, vol.14, pp.690-701, 2011. ,
Understanding and monitoring the consequences of human impacts on intraspecific variation, Evolutionary Applications, vol.10, pp.121-139, 2017. ,
The maintenance of genetic variation due to asymmetric gene flow in dendritic metapopulations, The American Naturalist, vol.174, pp.875-889, 2009. ,
Patterns of vegetation biodiversity: The roles of dispersal directionality and river network structure, Journal of Theoretical Biology, vol.252, pp.221-229, 2008. ,
A neutral metapopulation model of biodiversity in river networks, Journal of Theoretical Biology, vol.245, pp.351-363, 2007. ,
Unexpected fish diversity gradients in the Amazon basin, Science Advances, vol.5, p.8681, 2019. ,
URL : https://hal.archives-ouvertes.fr/hal-02439778
Genetic monitoring and complex population dynamics: Insights from a 12-year study of the Rio Grande silvery minnow, Evolutionary Applications, vol.5, pp.553-574, 2012. ,
Fates beyond traits: ecological consequences of human-induced trait change, Evolutionary Applications, vol.5, pp.183-191, 2012. ,
Combining genetic and demographic information to prioritize conservation efforts for anadromous alewife and blueback herring, Evolutionary Applications, vol.7, pp.212-226, 2014. ,
Integrating molecular tools into freshwater ecology: Developments and opportunities, Freshwater Biology, vol.59, pp.1559-1576, 2014. ,
Dendritic connectivity shapes spatial patterns of genetic diversity: A simulation-based study, Journal of Evolutionary Biology, vol.28, pp.986-994, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01445202
Combining genetic and demographic data for prioritizing conservation actions: Insights from a threatened fish species, Ecology and Evolution, vol.3, pp.2696-2710, 2013. ,
Systematic conservation planning for intraspecific genetic diversity, Proceedings of the Royal Society B: Biological Sciences, vol.285, 2018. ,
URL : https://hal.archives-ouvertes.fr/hal-01797434
Evolutionary processes driving spatial patterns of intra-specific genetic diversity in river ecosystems, Molecular Ecology, vol.24, pp.4586-4604, 2015. ,
The demographic history of populations experiencing asymmetric gene flow: Combining simulated and empirical data, Molecular Ecology, vol.22, pp.3279-3291, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-02650228
Modelling dendritic ecological networks in space: An integrated network perspective, Ecology Letters, vol.16, pp.707-719, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-02645883
Gene flow and genetic structure of the aquatic macrophyte Sparganium emersum in a linear unidirectional river, Freshwater Biology, vol.54, pp.64-76, 2009. ,
Genetic erosion and escalating extinction risk in frogs with increasing wildfire frequency, Journal of Applied Ecology, vol.54, pp.945-954, 2017. ,
Time trends in fish populations in metropolitan France: Insights from national monitoring data, Journal of Fish Biology, vol.79, pp.1436-1452, 2011. ,
From conservation genetics to conservation genomics, Annals of the New York Academy of Sciences, vol.1162, pp.357-368, 2009. ,
Multicollinearity in spatial genetics: Separating the wheat from the chaff using commonality analyses, Molecular Ecology, vol.24, pp.263-283, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01123861
Contribution of spatial heterogeneity in effective population sizes to the variance in pairwise measures of genetic differentiation, Methods in Ecology and Evolution, vol.8, pp.1866-1877, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-01681597
The relative contribution of river network structure and anthropogenic stressors to spatial patterns of genetic diversity in two freshwater fishes: A multiple-stressors approach, Freshwater Biology, vol.63, pp.6-21, 2018. ,
URL : https://hal.archives-ouvertes.fr/hal-01764118
Quantifying the individual impact of artificial barriers in freshwaters: A standardized and absolute index of genetic connectivity, 2019. ,
Challenges in analysis and interpretation of microsatellite data for population genetic studies, Ecology and Evolution, pp.4399-4428, 2014. ,
Modeling genetic connectivity in sticklebacks as a guideline for river restoration, Evolutionary Applications, vol.1, pp.475-488, 2008. ,
Guidelines for restoring connectivity around water mills: A population genetic approach to the management of riverine fish, Journal of Applied Ecology, vol.46, pp.562-571, 2009. ,
Variability of functional traits and their syndromes in a freshwater fish species (Phoxinus phoxinus): The role of adaptive and nonadaptive processes, Ecology and Evolution, vol.9, pp.2833-2846, 2019. ,
Intraspecific variation alters ecosystem and next-generation performance as much as temperature, 2018. ,
The community and ecosystem consequences of intraspecific diversity: A meta-analysis, Biological Reviews, vol.94, pp.648-661, 2019. ,
Detecting hybridization between wild species and their domesticated relatives, Molecular Ecology, vol.17, pp.285-293, 2008. ,
Using commonality analysis in multiple regressions: A tool to decompose regression effects in the face of multicollinearity, Methods in Ecology and Evolution, vol.5, pp.320-328, 2014. ,
Emerging threats and persistent conservation challenges for freshwater biodiversity, Biological Reviews, vol.94, pp.849-873, 2018. ,
Linking epigenetics and biological conservation: Towards a conservation epigenetics perspective, Functional Ecology, vol.34, pp.414-427, 2020. ,
URL : https://hal.archives-ouvertes.fr/hal-02350934
Genetic differentiation, diversity, and inbreeding in the mountain monkeyflower (Mimulus caespitosus) of the Washington Cascades, Canadian Journal of Botany, vol.67, pp.2017-2024, 1989. ,
Species conservation and systematics: The dilemma of subspecies, Trends in Ecology & Evolution, vol.1, pp.9-10, 1986. ,
Genetic admixture between captive-bred and wild individuals affects patterns of dispersal in a brown trout (Salmo trutta) population, Conservation Genetics, vol.19, pp.1269-1279, 2018. ,
Genetic monitoring as a promising tool for conservation and management, Trends in Ecology & Evolution, vol.22, pp.25-33, 2007. ,
Genetic isolation by environment or distance: Which pattern of gene flow is most common? Evolution, vol.68, pp.1-15, 2014. ,
A global meta-analysis of the relative extent of intraspecific trait variation in plant communities, Ecology Letters, vol.18, pp.1406-1419, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01237101
Evolutionary change in human-altered environments, Molecular Ecology, vol.17, pp.1-8, 2008. ,
Water: The epic struggle for wealth, power, and civilization, 2010. ,
Most species are not driven to extinction before genetic factors impact them, Proceedings of the National Academy of Sciences of the United States of America, vol.101, pp.15261-15264, 2004. ,
Mapping evolutionary process: A multi-taxa approach to conservation prioritization, Evolutionary Applications, vol.4, pp.397-413, 2011. ,
The role of dispersal in river network metacommunities: Patterns, processes, and pathways, Freshwater Biology, vol.63, pp.141-163, 2018. ,
Prepare river ecosystems for an uncertain future, Nature, vol.570, pp.301-303, 2019. ,
Island biogeography of genes and species, The American Naturalist, vol.162, pp.358-365, 2003. ,
Species diversity and genetic diversity: Parallel processes and correlated patterns, The American Naturalist, vol.166, pp.199-215, 2005. ,
Connections between species diversity and genetic diversity, Ecology Letters, vol.8, pp.767-781, 2005. ,
Drawing ecological inferences from coincident patterns of population-and community-level biodiversity, Molecular Ecology, vol.23, pp.2890-2901, 2014. ,
SSN: An R package for spatial statistical modeling on stream networks, Journal of Statistical Software, vol.56, pp.1-43, 2014. ,
Where's the conservation in conservation genetics?, Conservation Biology, vol.22, pp.802-804, 2008. ,
Let the concept of trait be functional! Oikos, vol.116, pp.882-892, 2007. ,
Longitudinal patterns of genetic diversity and larval density of the riverine caddisfly Hydropsyche orientalis (Trichoptera), Aquatic Sciences, vol.70, pp.377-387, 2008. ,
A framework for community and ecosystem genetics: From genes to ecosystems, Nature Reviews Genetics, vol.7, pp.510-523, 2006. ,
Community and ecosystem genetics: A consequence of the extended phenotype, Ecology, vol.84, pp.559-573, 2003. ,
The importance of being earnest: A trivial comedy for serious people, 1908. ,
A river runs through it: The causes, consequences, and management of intraspecific diversity in river networks, Evol Appl, vol.28, pp.1195-1213, 1943. ,