BIAFLOWS: A Collaborative Framework to Reproducibly Deploy and Benchmark Bioimage Analysis Workflows

Ulysse Rubens , Romain Mormont , Lassi Paavolainen , Volker Bäcker (1) , Benjamin Pavie , Leandro Scholz , Gino Michiels , Martin Maška (2) , Devrim Ünay (3) , Graeme Ball , Renaud Hoyoux , Rémy Vandaele (4) , Ofra Golani , Stefan Stanciu , Natasa Sladoje , Perrine Paul-Gilloteaux (5) , Raphaël Marée (6) , Sébastien Tosi

1 BCM - BioCampus
2 MUNI - Masaryk University [Brno]
3 Biomedical Engineering [Istanbul]
4 Institut Montefiore - Département d'Electricité, Electronique et Informatique (Liège)
5 SFR François Bonamy - Structure fédérative de recherche François Bonamy
6 Institut Montefiore - Department of Electrical Engineering and Computer Science

Domaines: Traitement des images [eess.IV]; Calcul parallèle, distribué et partagé [cs.DC]; Base de données [cs.DB]

Ulysse Rubens, Romain Mormont, Lassi Paavolainen, Volker Bäcker, Benjamin Pavie, et al.. BIAFLOWS: A Collaborative Framework to Reproducibly Deploy and Benchmark Bioimage Analysis Workflows. Patterns, 2020, 1, pp.100040. ⟨10.1016/j.patter.2020.100040⟩. ⟨hal-02799349⟩