B. Andresen, Current Trends in Finite-Time Thermodynamics, Angew. Chem. Int. Ed, vol.50, pp.2690-2705, 2011.

P. Baaske, F. M. Weinert, S. Duhr, K. H. Lemke, M. J. Russell et al., Extreme accumulation of nucleotides in simulated hydrothermal pore systems, PNAS, vol.104, pp.9346-9351, 2007.

P. Bak, How Nature works, 1996.

T. S. Baines, A. Bigdeli, O. F. Bustinza, V. G. Shi, J. Baldwin et al., Servitization: Revisiting the State-of-the-art and Research Priorities, Int. J. Oper. Prod. Manag, vol.37, pp.256-278, 2017.

A. Barthe-delanoe, S. Truptil, F. Bénaben, and H. Pingaud, Event-driven agility of interoperability during the Run-time of collaborative processes, Decis. Supp. Syst, vol.59, pp.171-179, 2014.
URL : https://hal.archives-ouvertes.fr/hal-01207250

T. Bayen and F. Mairet, Minimal time control of fed-batch bioreactor with product inhibition, Bioproc. Biosys. Engin, vol.36, pp.1485-1496, 2013.
URL : https://hal.archives-ouvertes.fr/hal-00734225

A. Bejan, Shape and structure, from engineering to nature, 2000.

A. Bejan, Evolution in thermodynamics, Evolution in thermodynamics. Appl. Phys, vol.4, pp.1208-1219, 2017.

A. Bejan and S. Lorente, The constructal law of the thermodynamics of flow systems with configuration, Int. J. Heat Mass Trans, vol.47, pp.3203-3214, 2004.

A. Bejan and S. Lorente, Constructal law of design and evolution: physics, biology, technology, and society, J. Appl. Phys, vol.113, p.151301, 2013.
URL : https://hal.archives-ouvertes.fr/hal-01850835

A. Bejan and D. Tondeur, Equipartition, optimal allocation, and the constructal approach to predicting organization in nature, Rev. Gén. Therm, vol.37, pp.165-180, 1998.

R. B. Bird, W. E. Stewart, and E. N. Lightfoot, Transport Phenomena, 2006.

M. Boix, L. Montastruc, C. Azzaro-pantel, and S. Domenech, Optimization methods applied to the design of eco-industrial parks: a literature review, J. Clean. Prod, vol.87, pp.303-317, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01843098

S. Buchholz, F3 Factory Final Report to European Commission, 2014.

W. M. Budzianowski and K. Postawa, Total chain integration of sustainable biorefinery systems, Appl. Energy, vol.184, pp.1432-1446, 2016.

. Cfnie, Centre for Nature-Inspired Engineering, 2019.

X. D. Chen, Scoping biology-inspired chemical engineering Chin, J. Chem. Eng, vol.24, issue.1, pp.1-8, 2016.

M. Coppens, A nature-inspired approach to reactor and catalysis engineering, Curr. Op. Chem. Eng, vol.1, issue.3, pp.281-289, 2012.

M. Coppens and J. R. Van-ommen, Structuring chaotic fluidized beds, Chem. Eng. J, vol.96, pp.117-124, 2003.

M. Coppens, Scaling up and down in a nature inspired way, Ind. Eng. Chem. Res, vol.44, pp.5011-5019, 2005.

M. Coppens, Nature-Inspired Chemical Engineering, a Transformative Methodology for Innovation. Opening talk at Nature-Inspired Engineering Conference, pp.8-13, 2019.

Y. Demirel, Exergy use in bioenergetics, Int. J. Exergy, vol.1, pp.128-146, 2004.

Y. Demirel and V. Gerbaud, Nonequilibrium thermodynamics. Transport and rate processes in physical, chemical and biological systems, 2019.

Y. Demirel and S. I. Sandler, Effects of concentration and temperature on the coupled heat and mass transport in liquid mixtures, Int. J. Heat Mass Trans, vol.45, pp.75-86, 2002.

Y. Demirel and S. I. Sandler, Thermodynamics and bioenergetics, Biophys. Chem, vol.97, pp.87-111, 2002.

Y. Demirel and S. I. Sandler, Nonequilibrium Thermodynamics in Engineering and Science, J. Phys. Chem. B, vol.108, pp.31-43, 2004.

R. C. Dewar, C. H. Lineweavern, R. K. Niven, and K. Regenauer-lieb, Beyond the Second Law. Entropy Production and Non-Equilibrium Systems, 2014.

R. C. Dewar and A. Maritan, Beyond the Second Law. Entropy Production and Non-Equilibrium Systems, 2014.

B. Faissat, K. Knudsen, E. H. Stenby, and F. Montel, Fundamental Statements about Thermal Diffusion for a Multicomponent Mixture in a Porous Medium, Fluid Phase Equil, vol.100, pp.209-222, 1994.

J. Fischbarg, J. A. Hernandez, A. A. Rubashkin, P. Iserovich, V. I. Cacace et al., Epithelial Fluid Transport is Due to Electro-osmosis (80%), Plus Osmosis (20%), J Membrane Biol, vol.250, pp.327-333, 2017.

S. J. Gould and N. Eldredge, Punctuated equilibria: the tempo and mode of evolution reconsidered, Paleobiology, vol.3, pp.115-151, 1977.

M. Grmela, Geometry of mesoscopic nonequilibrium thermodynamics Entropy, vol.17, pp.5938-5964, 2015.

M. Grmela, GENERIC guide to the multiscale dynamics and Thermodynamics, J. Phys. Commun, 2018.

M. Hartmann and W. Schwieger, Hierarchically-structured porous materials: from basic understanding to applications, Chem. Soc. Rev, vol.45, pp.3311-3312, 2016.

M. Houngbe, A. Barthe-delanoe, and S. Negny, Towards Virtual Biorefineries, IFIP Advances in Inform. Comm. Technol, vol.534, pp.571-580, 2018.
URL : https://hal.archives-ouvertes.fr/hal-02191156

M. Houngbe, A. Barthe-delanoe, and S. Negny, Servitization of biomass processing for a virtual biorefinery: application to the lignocellulosic biomass in a French local territory, IFIP Advances in Inform. Comm. Technol, vol.568, pp.477-486, 2019.
URL : https://hal.archives-ouvertes.fr/hal-02478754

S. T. Hwang, Nonequilibrium thermodynamics of membrane transport, AIChE J, vol.50, pp.862-870, 2004.

E. Johannessen and S. Kjelstrup, A Highway in state space for reactors with minimum entropy production, Chem. Eng. Sci, vol.60, pp.3347-3361, 2005.

D. Jou, J. Casas-vázquez, and G. Lebon, Extended Irreversible Thermodynamics, p.9048130733, 2010.

V. Jurjevic, Geometric Control Theory. (Cambridge Studies in Advanced Mathematics, book 52) 1 st Ed, 1997.

S. Karan, Z. Jiang, and A. G. Livingston, Sub-10 nm polyamide nanofilms with ultrafast solvent transport for molecular separation, Science, vol.348, issue.6241, pp.1347-1351, 2015.

S. Kjelstrup, M. Coppens, J. G. Pharoah, and P. Pfeifer, Nature-Inspired Energy-and Material-Efficient Design of a Polymer Electrolyte Membrane Fuel Cell. Energy Fuels, vol.24, pp.5097-5108, 2010.

S. Kjelstrup, E. Sauar, and K. M. Liens, Equipartition of Forces: review of a new principle for process design and optimization, Period. Polytech. Ser. Chem. Eng, vol.42, pp.103-114, 1998.

S. Kjelstrup, D. Bedeaux, I. Inzoli, and J. M. Simon, Criteria for validity of thermodynamics equations from non-equilibrium molecular dynamics simulations, Energy, vol.33, pp.1185-1196, 2008.

S. Kjelstrup, D. Bedeaux, A. Hansen, B. Hafskjold, and O. Galteland, Non-isothermal Transport of Multiphase Fluids in Porous Media, The Entropy Production. Front. Phys, vol.6, p.126, 2018.

D. Kondeputi and I. Prigogine, Modern thermodynamics. From Heat Engines to Dissipative Structures, vol.111837181, 2014.

R. Kovacs and P. Van, Generalized heat conduction in heat pulse experiments, Int. J. Heat. Mass. Transf, vol.83, pp.613-620, 2005.

G. Lebon and D. Jou, Early history of extended irreversible thermodynamics (1953-1983): An exploration beyond local equilibrium and classical transport theory, Eur. J. Phys, pp.4-36, 2014.

P. Letellier, A. Mayaffre, and M. Turmine, Melting point depression of nanosolids: nonextensive thermodynamics approach, Phys. Rev. B, vol.76, p.45428, 2007.

P. Letellier and M. Turmine, Non-Applicability of the Gibbs?Duhem Relation in Nonextensive Thermodynamics. Case of Micellar Solutions, J. Phys. Chem. B, vol.119, pp.4143-4154, 2015.

J. Li, W. Ge, W. Wang, N. Yang, and W. Huang, Focusing on mesoscales: from the energy-minimization multiscale model to mesoscience, Curr. Op. Chem. Eng, vol.13, pp.10-23, 2016.

J. Li, W. Huang, J. Chen, W. Ge, and C. Hou, Mesoscience based on the EMMS principle of compromise in competition, Chem. Eng. J, vol.333, pp.327-335, 2018.

M. Liu, J. Xiao, and X. D. Chen, A Soft-Elastic Reactor Inspired by the Animal Upper Digestion Tract, Chem. Eng. Technol, vol.41, issue.5, pp.1051-1056, 2018.

X. Liu, D. Newsome, and M. Coppens, Dynamic Monte Carlo simulations of binary self-diffusion in ZSM-5, Microp. and Mesop. Mat, vol.125, pp.149-159, 2009.

L. M. Martyushev and V. D. Seleznev, Maximum entropy production principle in physics, chemistry and biology, Phys. Rep. Rev. Sect. Phys. Lett, vol.426, pp.1-45, 2006.

L. M. Martyushev, Entropy and entropy production: old misconceptions and new breakthroughs, Entropy, vol.15, pp.1152-1170, 2013.

L. M. Martyushev and V. D. Seleznev, The restriction of the maximum entropy production principle, Phys. A, vol.410, pp.17-21, 2014.

B. Maschke, About the lift of irreversible thermodynamic systems to the Thermodynamic State Space, IFAC PapersOnLine, pp.40-045, 2016.

E. Mittag, D. J. Evans, and . S. Williams, Verification of time-reversibility requirement for systems satisfying the Evans-Searles fluctuation theorem, Pure appl. Chem, vol.79, issue.8, pp.1361-1368, 2007.

B. Montreuil, R. D. Meller, and E. Ballot, Physical internet foundations. Chap. 10 in Service orientation in holonic and multi agent, 2013.

M. Moroz, On the variational formulation of the maximum energy dissipation for non-equilibrium chemical thermodynamics, Chem. Phys. Lett, vol.457, pp.448-452, 2008.

M. Moroz and D. I. Wimpenny, On the variational framework employing optimal control for biochemical thermodynamics, Chem. Phys, vol.12, pp.77-85, 2011.

M. Moroz, The Common Extremalities in Biology and Physics: Maximum Energy Dissipation Principle in Chemistry, Physics and Evolution, 2011.

H. C. Öttinger, Beyond Equilibrium Thermodynamics, 2005.

C. Parra-cabrera, C. Achille, S. Kuhn, and R. Ameloot, 3D printing in chemical engineering and catalytic technology: structured catalysts, mixers and reactors, Chem. Soc. Rev, vol.47, issue.1, pp.209-230, 2018.

M. Polettini, Fact-checking Ziegler's maximum entropy production principle beyond the linear regime and towards steady states, Entropy, vol.15, pp.2570-2584, 2013.

L. S. Pontryagin, V. G. Boltyanskii, R. V. Gamkrelidze, and E. F. Mishchenko, The Mathematical Theory of Optimal Processes, pp.1-360, 1962.

G. Pruessner, Self organized criticality. Theory, models and Characterisation, 2012.

J. M. Rubi, Mesoscopic Thermodynamics for the Dynamics of Small-Scale Systems, Entropy, vol.17, issue.10, pp.7201-7212, 2015.

L. C. Sang and M. Coppens, Effects of surface curvature and surface chemistry on the structure and activity of proteins adsorbed in nanopores, Phys. Chem, vol.13, pp.6689-6698, 2011.

L. C. Sang, A. Vinu, and M. Coppens, General Description of the Adsorption of Proteins at Their Isoelectric Point in Nanoporous Materials, Langmuir, vol.27, pp.13828-13837, 2011.

E. Sauar, S. Kjelstrup, and K. M. Liens, Equipartition of Forces -Extension to Chemical Reactors, Comp. Chem. Eng, vol.21, pp.29-34, 1997.

E. Sauar, G. Siragusa, and B. Andresen, Equal Thermodynamic Distance and Equipartition of Forces Principles Applied to Binary Distillation, J. Phys. Chem. A, vol.105, pp.2312-2320, 2001.

M. E. Schimpf and J. C. Giddings, Characterization of thermal diffusion in polymer solutions by thermal field-flow fractionation: dependence on polymer and solvent parameters, J. Polymer Sci. part B, vol.27, pp.1317-1332, 1989.

M. Schweizer, H. C. Öttinger, and T. Savin, Nonequilibrium thermodynamics of an interface, Phys. Rev. E, vol.93, p.52803, 2016.

O. Sharomi and T. Malik, Optimal control in epidemiology. Ann. Oper. Res, vol.251, p.55, 2017.

J. Siefker, P. Karande, and M. Coppens, Packaging biological cargoes in mesoporous materials: opportunities for drug delivery, Expert Opin. Drug Deliv, vol.11, pp.1781-1793, 2014.

J. W. Stucki, The optimal efficiency and the economic degrees of coupling of oxidative phosphorylation, Eur. J. Biochem, vol.109, pp.269-283, 1980.

J. W. Stucki, Nonequilibrium thermodynamic sensitivity of oxidative phosphorylation, Proc. Royal. Soc. London Series. Biol. Sci, vol.244, pp.197-202, 1991.

D. Tondeur, Equipartition of entropy production: a design and optimization criterion in chemical engineering, Advances in thermodynamics, vol.4, 1990.

D. Tondeur and E. Kvaalen, Equipartition of entropy production. An optimality criterion for transfer and separation processes, Ind. Eng. Chem. Res, vol.26, pp.50-56, 1987.

P. Trogadas, J. I. Cho, T. P. Neville, J. Marquis, B. Wu et al., A lung-inspired approach to scalable and robust fuel cell design, Energy Environ. Sci, vol.11, pp.136-143, 2018.

P. Trogadas, M. M. Nigra, and M. Coppens, Nature-inspired optimization of hierarchical porous media for catalytic and separation processes, New Journal of Chemistry, vol.40, issue.5, pp.4016-4026, 2016.

P. Trogadas, V. Ramani, P. Strasser, T. F. Fuller, and M. Coppens, Hierarchically Structured Nanomaterials for Electrochemical Energy Conversion, Angew. Chem. Int. Ed, vol.55, issue.1, pp.122-148, 2016.

C. Tsallis, Possible generalization of Boltzmann-Gibbs statistics, J. Stat. Phys, vol.52, pp.479-487, 1988.

C. Tsallis, R. S. Mendes, and A. R. Plastino, The role of constraints within generalized nonextensive statistics, Physica A, vol.261, pp.534-554, 1998.

M. Turmine, A. Mayaffre, and P. Letellier, Nonextensive approach to thermodynamics: analysis and suggestions, and applications to chemical reactivity, J. Phys. Chem. B, vol.108, pp.18980-18987, 2004.

T. Weber and . Modular-plants, Flexible chemical production by modularization and standardization -status quo and future trends, 2016.

G. B. West, J. H. Brown, and B. J. Enquist, A general model for the origin of allometric scaling laws in biology, Science, vol.276, pp.122-126, 1997.

L. Zhou, C. Zhang, I. A. Karimi, and M. Kraft, An ontology framework towards decentralized information management for eco-industrial parks, Comput. Chem. Eng, vol.118, pp.49-63, 2018.