Insights into the regulation of protein abundance from proteomic and transcriptomic analyses, Nat Rev Genet, vol.13, issue.4, pp.227-259, 2013. ,
Multiple ways to regulate translation initiation in bacteria: Mechanisms, regulatory circuits, dynamics, Biochimie, vol.114, p.25792421, 2015. ,
Genome-wide analysis of growth phase-dependent translational and transcriptional regulation in halophilic archaea, BMC Genomics, vol.8, pp.1-17, 2007. ,
Ribosome profiling reveals an adaptation strategy of reduced bacterium to acute stress, Biochimie, vol.132, p.27984202, 2017. ,
Analysis of translation using polysome profiling, Nucleic Acids Res, vol.45, issue.3, p.28180329, 2017. ,
Genome-wide analysis of mRNA translation profiles in Saccharomyces cerevisiae, Proc Natl Acad Sci U S A, vol.100, issue.7, p.12660367, 2003. ,
Bacterial translational regulations: high diversity between all mRNAs and major role in gene expression, BMC Genomics, vol.13, issue.1, p.528, 2012. ,
URL : https://hal.archives-ouvertes.fr/hal-01268281
The significance of translation regulation in the stress response, BMC Genomics, vol.14, issue.1, p.588, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-01268301
Changes in Polysome Association of mRNA Throughout Growth and Development in Arabidopsis thaliana, Plant Cell Physiol, vol.56, issue.11, p.133, 2015. ,
Translatome analysis at the egg-to-embryo transition in sea urchin, Nucleic Acids Res, vol.46, issue.9, p.29660001, 2018. ,
Translational responses and oxidative stress of mussels experimentally exposed to Hg, Cu and Cd: One pattern does not fit at all, Aquat Toxicol, vol.105, issue.1-2, p.21718659, 2011. ,
Yeast translational response to high salinity: global analysis reveals regulation at multiple levels. RNA, vol.14, p.18495938, 2008. ,
Genome-Wide Analyses of Early Translational Responses to Elevated Temperature and High Salinity in Arabidopsis thaliana, Plant Cell Physiol, vol.51, issue.3, pp.448-62, 2010. ,
An MSC2 Promoter-lacZ Fusion Gene Reveals Zinc-Responsive Changes in Sites of Transcription Initiation That Occur across the Yeast Genome, PLoS One, vol.11, issue.9, p.27657924, 2016. ,
Global gene expression profiling reveals widespread yet distinctive translational responses to different eukaryotic translation initiation factor 2B-targeting stress pathways, Mol Cell Biol, vol.25, issue.21, p.16227585, 2005. ,
Eukaryotic translation elongation factor-1 alpha is associated with a specific subset of mRNAs in Trypanosoma cruzi, BMC Microbiol, vol.15, p.104, 2015. ,
Translation Elongation Factor 4 (LepA) Contributes to Tetracycline Susceptibility by Stalling Elongating Ribosomes, Antimicrob Agents Chemother, vol.62, issue.8, p.29784847, 2018. ,
The Influence of 5'-Secondary Structures upon Ribosome Binding to mRNA during Translation in Yeast, J Biol Chem, vol.268, issue.35, 1993. ,
Codon optimality is a major determinant of mRNA stability, Cell, vol.160, issue.6, p.25768907, 2015. ,
A Computational and Experimental Approach Reveals that the 5 0 -Proximal Region of the 5 0 -UTR has a Cis-Regulatory Signature Responsible for Heat Stress-Regulated mRNA Translation in Arabidopsis, Plant Cell Physiol, vol.54, issue.4, p.23314753, 2013. ,
Translatome profiling: Methods for genome-scale analysis of mRNA translation, Brief Funct Genomics, vol.15, issue.1, p.25380596, 2016. ,
Defining the Role of ATP Hydrolysis in Mitotic Segregation of Bacterial Plasmids, PLoS Genet, vol.9, issue.12, p.24367270, 2013. ,
URL : https://hal.archives-ouvertes.fr/hal-00944950
Dual role of transcription and transcript stability in the regulation of gene expression in Escherichia coli cells cultured on glucose at different growth rates, Nucleic Acids Res, vol.42, issue.4, p.24243845, 2014. ,
The stability of an mRNA is influenced by its concentration: a potential physical mechanism to regulate gene expression, Nucleic Acids Res, vol.45, issue.20, p.28977619, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-01882991
Role of mRNA stability during genome-wide adaptation of Lactococcus lactis to carbon starvation, J Biol Chem, vol.280, issue.43, p.16131490, 2005. ,
Transcriptome analysis of Lactococcus lactis in coculture with Saccharomyces cerevisiae, Appl Environ Microbiol, vol.74, issue.2, p.17993564, 2008. ,
A new mathematical model for relative quantification in real-time RT-PCR, Nucleic Acids Res, vol.29, issue.9, p.11328886, 2001. ,
The Csr system regulates Escherichia coli fitness by controlling glycogen accumulation and energy levels, MBio, vol.8, issue.5, p.29089432, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-01672038
The Escherichia coli CysZ is a pH dependent sulfate transporter that can be inhibited by sulfite, Biochim Biophys Acta, vol.1838, p.24657232, 2014. ,
Genetic regulatory mechanisms in the synthesis of proteins, J Mol Biol, vol.3, issue.3, pp.318-56, 1961. ,
Codon Usage Influences the Local Rate of Translation Elongation to Regulate Co-translational Protein Folding, Mol Cell, vol.59, issue.5, p.26321254, 2015. ,
The anti-Shine-Dalgarno sequence drives translational pausing and codon choice in bacteria, Nature, vol.484, issue.7395, p.22456704, 2012. ,
Application of sorting and next generation sequencing to study 5 0 -UTR influence on translation efficiency in ,
, Nucleic Acids Res, vol.45, issue.6, p.27899632, 2017.
The cspA mRNA is a thermosensor that modulates translation of the cold-shock protein CspA, Mol Cell, vol.37, issue.1, p.20129052, 2010. ,
URL : https://hal.archives-ouvertes.fr/hal-00475727
Bacterial small RNA regulators: versatile roles and rapidly evolving variations, Cold Spring Harb Perspect Biol, vol.3, issue.12, p.20980440, 2011. ,
Global role of the bacterial posttranscriptional regulator CsrA revealed by integrated transcriptomics, Nat Commun, vol.8, issue.1, p.29150605, 2017. ,
Evolution at two levels of gene expression in yeast, Genome Res, vol.24, issue.3, p.24318729, 2014. ,
Evolution of gene regulation during transcription and translation, Genome Biol Evol, vol.7, issue.4, p.25877616, 2015. ,