J. Ahrens, B. Geveci, and C. Law, Paraview: An end-user tool for large data visualization. The visualization handbook, vol.717, 2005.

A. Alba, R. M. Aguilar-ponce, J. F. Vigueras-gómez, and E. Arce-santana, Phase correlation based image alignment with subpixel accuracy, Adv. Artificial Intell, pp.171-182, 2012.

D. Ambrosi, A. Duperray, V. Peschetola, and C. Verdier, Traction patterns of tumor cells, J Math Biol, vol.58, pp.163-181, 2009.
URL : https://hal.archives-ouvertes.fr/hal-00256642

M. Balci and H. Foroosh, Subpixel registration directly from the phase difference, EURASIP J Advances Signal Processing, pp.1-12, 2006.

R. J. Bastiaans, Cross-correlation PIV; theory, implementation and accuracy, Faculty of Mechanical Engineering, 2000.

J. P. Butler, I. M. Tolic-nørrelykke, B. Fabry, and J. J. Fredberg, Traction fields, moments, and strain energy that cells exert on their surroundings, Am J Physiol Cell Physiol, vol.282, issue.3, pp.595-605, 2002.

M. Dembo and Y. L. Wang, Stresses at the cell-to-substrate interface during locomotion of fibroblasts, Biophys J, vol.76, issue.4, pp.2307-2316, 1999.

I. Ersoy, F. Bunyak, M. A. Mackey, and K. Palaniappan, Cell segmentation using Hessian-based detection and contour evolution with directional derivatives, 15th IEEE Int. Conf. Image Process, 2008.

H. Foroosh, J. B. Zerubia, and M. Berthod, Extension of phase correlation to subpixel registration, IEEE Trans Image Process, vol.11, issue.3, pp.188-200, 2002.

C. Franck, S. Hong, S. Maskarinec, D. Tirrell, and G. Ravichandran, Three-dimensional full-field measurements of large deformations in soft materials using confocal microscopy and digital volume correlation, Exp Mech, vol.47, issue.3, pp.427-438, 2007.

P. Friedl, S. Borgmann, and E. B. Bröcker, Amoeboid leukocyte crawling through extracellular matrix: lessons from the Dictyostelium paradigm of cell movement, J Leukoc Biol, vol.70, issue.4, pp.491-509, 2001.

P. Friedl and K. Wolf, Proteolytic interstitial cell migration: a five-step process, Cancer Metastasis Rev, vol.28, issue.1-2, pp.129-135, 2009.

F. J. Harris, On the use of windows for harmonic analysis with the discrete Fourier transform, Proceedings of the IEEE, vol.66, issue.1, pp.51-83, 1978.

A. Iordan, A. Duperray, A. Gérard, A. Grichine, and C. Verdier, Breakdown of cell-collagen networks through collagen remodeling, Biorheology, vol.47, pp.277-295, 2010.
URL : https://hal.archives-ouvertes.fr/hal-00461130

J. Kim, C. Jones, N. S. Groves, and B. Sun, Three-Dimensional Reflectance Traction Microscopy, PLoS One, vol.11, issue.6, p.156797, 2016.

T. M. Koch, S. Münster, N. Bonakdar, J. P. Butler, and B. Fabry, 3D Traction forces in cancer cell invasion, PLoS One, vol.7, issue.3, p.33476, 2012.

C. Kuglin, The phase correlation image alignment method, Proc. Int. Conf. on Cybernetics Society, pp.163-165, 1975.

L. Laforgue, Migration de cellules cancéreuses dans des gels de collagène 3D, 2016.

W. R. Legant, J. S. Miller, B. L. Blakely, D. M. Cohen, G. M. Genin et al., Measurement of mechanical tractions exerted by cells in three-dimensional matrices, Nat Methods, vol.7, issue.12, pp.969-971, 2010.

M. Machacek, L. Hodgson, C. Welch, H. Elliott, O. Pertz et al., Coordination of Rho GTPase activities during cell protrusion, Nature, vol.461, issue.7260, pp.99-103, 2009.

R. Manduchi and G. A. Mian, Accuracy analysis for correlation-based image registration algorithms, IEEE Int. Symp. Circuits & Systems, vol.1, pp.834-837, 1993.

J. R. Masters, P. J. Hepburn, L. Walker, W. J. Highman, L. K. Trejdosiewicz et al., Tissue culture model of transitional cell carcinoma: characterization of twenty-two human urothelial cell lines, Cancer Res, vol.46, issue.7, pp.3630-3636, 1986.

E. H. Meijering, W. J. Niessen, and M. A. Viergever, Quantitative evaluation of convolution-based methods for medical image interpolation, Medical Image Analysis, vol.5, issue.2, pp.111-126, 2001.

J. Notbohm, A. Lesman, D. A. Tirrell, and G. Ravichandran, Quantifying cell-induced matrix deformation in three dimensions based on imaging matrix fibers, Integr Biol, vol.7, pp.1186-1195, 2015.

N. Otsu, A threshold selection method from gray-level histograms, IEEE Trans on systems, vol.9, issue.1, pp.62-66, 1979.

V. Peschetola, V. M. Laurent, A. Duperray, R. Michel, A. D. Preziosi et al., Time-dependent traction force microscopy for cancer cells as a measure of invasiveness, Cytoskeleton, vol.70, issue.4, pp.201-214, 2013.
URL : https://hal.archives-ouvertes.fr/hal-00696105

J. Riedl, A. H. Crevenna, K. Kessenbrock, J. H. Yu, D. Neukirchen et al., Lifeact: a versatile marker to visualize F-actin, Nat Methods, vol.5, issue.7, pp.605-607, 2008.

D. Riveline, E. Zamir, N. Q. Balaban, U. S. Schwarz, T. Ishizaki et al., Focal contacts as mechanosensors: externally applied local mechanical force induces growth of focal contacts by an mDia1-dependent and ROCK-independent mechanism, J Cell Biol, vol.153, issue.6, pp.1175-1186, 2001.

C. Roux, A. Duperray, V. M. Laurent, R. Michel, V. Peschetola et al., Prediction of traction forces of motile cells, Interface Focus, vol.6, 2016.
URL : https://hal.archives-ouvertes.fr/hal-01391213

S. Roux, J. Réthoré, and F. Hild, Digital image correlation and fracture: an advanced technique for estimating stress intensity factors of 2D and 3D cracks, J Phys D: Appl Phys, vol.42, p.214004, 2009.
URL : https://hal.archives-ouvertes.fr/hal-00381646

B. Sabass, M. L. Gardel, C. M. Waterman, and U. S. Schwarz, High resolution traction force microscopy based on experimental and computational advances, Biophys J, vol.94, issue.1, pp.207-220, 2008.

F. Scarano, Iterative image deformation methods in PIV, Meas Sci Technol, vol.13, issue.1, p.1, 2001.

J. Schmedes, R. J. Archuleta, and D. Lavallée, Correlation of earthquake source parameters inferred from dynamic rupture simulations, J Geophys Res, vol.115, p.3304, 2010.

U. S. Schwarz, N. Q. Balaban, D. Riveline, A. Bershadsky, B. Geiger et al., Calculation of forces at focal adhesions from elastic substrate data: the effect of localized force and the need for regularization, Biophys J, vol.83, issue.3, pp.1380-1394, 2002.

M. P. Sheetz, D. Felsenfeld, C. G. Galbraith, and D. Choquet, Cell migration as a five-step cycle, Biochem Soc Symp, vol.65, pp.233-243, 1999.

J. Steinwachs, C. Metzner, K. Skodzek, N. Lang, I. Thievessen et al., Three-dimensional force microscopy of cells in biopolymer networks, Nat Methods, vol.13, pp.171-176, 2016.

K. Takita, Y. Sasaki, T. Higuchi, and K. Kobayashi, High-accuracy subpixel image registration based on phase-only correlation, IEICE Trans on fundamentals of electronics, communications & computer sciences, vol.86, issue.8, pp.1925-1934, 2003.

M. Théry, A. Pépin, E. Dressaire, Y. Chen, and M. Bornens, Cell distribution of stress fibres in response to the geometry of the adhesive environment, Cell Motil Cytoskeleton, vol.63, issue.6, pp.341-355, 2006.

G. Vitale, L. Preziosi, and A. D. , A numerical method for the inverse problem of cell traction in 3D, Inverse Problems, vol.28, p.95013, 2012.

Y. L. Wang and R. J. Pelham, Preparation of a flexible, porous polyacrylamide substrate for mechanical studies of cultured cells, Methods Enzymol, vol.298, pp.489-496, 1998.

K. Wolf, M. T. Lindert, M. Krause, S. Alexander, J. T. Riet et al., Physical limits of cell migration: control by ECM space and nuclear deformation and tuning by proteolysis and traction force, J Cell Biol, vol.201, issue.7, pp.1069-1084, 2013.