Arsenic removal from acidic solutions with biogenic ferric precipitates, J. Hazard. Mater, vol.306, pp.124-132, 2016. ,
DOI : 10.1016/j.jhazmat.2015.12.012
Combination of 16S rRNA-targeted oligonucleotide probes with flow cytometry for analyzing mixed microbial populations, Appl. Environ. Microbiol, vol.56, pp.1919-1925, 1990. ,
Field rates for natural attenuation of arsenic in Tinto Santa Rosa acid mine drainage, 2010. ,
, J. Hazard. Mater, vol.177, pp.1102-1111
Microbial communities in acid mine drainage, FEMS Microbiol. Ecol, vol.44, pp.139-152, 2003. ,
DOI : 10.1016/s0168-6496(03)00028-x
URL : https://academic.oup.com/femsec/article-pdf/44/2/139/18091095/44-2-139.pdf
Extremely acidophilic protists from acid mine drainage host rickettsialeslineage endosymbionts that have intervening sequences in their 16S rRNA genes, Appl. Environ. Microbiol, vol.69, pp.5512-5518, 2003. ,
DOI : 10.1128/aem.69.9.5512-5518.2003
URL : https://aem.asm.org/content/69/9/5512.full.pdf
Emergence shapes the structure of the seed microbiota, Appl. Environ. Microbiol, vol.81, pp.1257-1266, 2015. ,
URL : https://hal.archives-ouvertes.fr/hal-01153480
Isolation and study of two strains of Leptospirillum-like bacteria from a natural mixed population cultured on a cobaltiferous pyrite substrate, Antonie Van Leeuwenhoek, vol.66, pp.295-302, 1994. ,
An arsenic(III)-oxidizing bacterial population: selection, characterization, and performance in reactors, J. Appl. Microbiol, vol.93, pp.656-667, 2002. ,
DOI : 10.1046/j.1365-2672.2002.01726.x
Metabolic diversity among main microorganisms inside an arsenic-rich ecosystem revealed by meta-and proteogenomics, ISME J, vol.5, pp.1735-1747, 2011. ,
DOI : 10.1038/ismej.2011.51
URL : https://hal.archives-ouvertes.fr/hal-01631857
Depth-dependent geochemical and microbiological gradients in Fe(III) deposits resulting from coal mine-derived acid mine drainage, Front. Microbiol, vol.5, p.215, 2014. ,
DOI : 10.3389/fmicb.2014.00215
URL : https://www.frontiersin.org/articles/10.3389/fmicb.2014.00215/pdf
Application of a depositional facies model to an acid mine drainage site, Appl. Environ. Microbiol, vol.77, pp.545-554, 2011. ,
Diversity of microorganisms in Fe-As-Rich acid mine drainage waters of carnoulès, France. Appl. Environ. Microbiol, vol.72, pp.551-556, 2006. ,
Microbial transformations of arsenic: from metabolism to bioremediation, Metal-microbe Interactions and Bioremediation: Principle and Applications for Toxic Metals, 2017. ,
Mediation of arsenic oxidation by Thiomonas sp. in acid-mine drainage (Carnoulès, France), J. Appl. Microbiol, vol.95, pp.492-499, 2003. ,
Characterization of the active bacterial community involved in natural attenuation processes in arsenic-rich creek sediments, Microb. Ecol, vol.61, pp.793-810, 2011. ,
Carbon and arsenic metabolism in Thiomonas strains: differences revealed diverse adaptation processes, BMC Microbiol, vol.9, p.127, 2009. ,
URL : https://hal.archives-ouvertes.fr/hal-00512152
Specific iron oxidation and cell growth rates of bacteria in batch culture, Hydrometallurgy, vol.98, pp.148-155, 2009. ,
Bacterial immobilization and oxidation of arsenic in acid mine drainage (Carnoulès creek, France), Water Res, vol.37, pp.2929-2936, 2003. ,
Influence of waterfall aeration and seasonal temperature variation on the iron and arsenic attenuation rates in an acid mine drainage system, Appl. Geochem, vol.27, 1966. ,
Microbial communities, processes and functions in acid mine drainage ecosystems, Curr. Opin. Biotechnol, vol.38, pp.150-158, 2016. ,
Oxidation of iron, sulfur and arsenic in mine waters and mine wastes: an important role for novel Thiomonas spp, pp.639-646, 2004. ,
The domain-specific probe EUB338 is insufficient for the detection of all Bacteria: development and evaluation of a more comprehensive probe set, Syst. Appl. Microbiol, vol.22, pp.434-444, 1999. ,
Characterization of arsenic resistant and arsenopyrite oxidizing Acidithiobacillus ferrooxidans from Hutti gold leachate and effluents, Bioresour. Technol, vol.99, pp.7514-7520, 2008. ,
Mineral and iron oxidation at low temperatures by pure and mixed cultures of acidophilic microorganisms, Biotechnol. Bioeng, vol.97, pp.1205-1215, 2007. ,
Immobilization of arsenite and ferric Iron by Acidithiobacillus ferrooxidans and its relevance to acid mine drainage, Appl. Environ. Microbiol, vol.69, pp.6165-6173, 2003. ,
UCHIME improves sensitivity and speed of chimera detection, Bioinformatics, vol.27, pp.2194-2200, 2011. ,
An updated insight into the natural attenuation of As concentrations in Reigous Creek (southern France), Appl. Geochem, vol.25, pp.1949-1957, 2010. ,
Kinetic control on the formation of tooeleite, schwertmannite and jarosite by Acidithiobacillus ferrooxidans strains in an As(III)-rich acid mine water, Chem. Geol, vol.265, pp.432-441, 2009. ,
URL : https://hal.archives-ouvertes.fr/hal-00515293
Dominance of "Gallionella capsiferriformans" and heavy metal association with Gallionella-like stalks in metal-rich pH 6 mine water discharge, Proceedings of the Difpolmine (Diffuse Pollution From Mining Activities), vol.14, pp.68-90, 2006. ,
A field-pilot for passive bioremediation of As-rich acid mine drainage, J. Environ. Manage, vol.232, pp.910-918 ,
URL : https://hal.archives-ouvertes.fr/hal-02075868
Hydraulic retention time affects bacterial community structure in an As-rich acid mine drainage (AMD) biotreatment process, Appl. Microbiol. Biotechnol, vol.102, pp.9803-9813, 2018. ,
URL : https://hal.archives-ouvertes.fr/hal-02129748
Biological attenuation of arsenic and iron in a continuous flow bioreactor treating acid mine drainage (AMD), Water Res, vol.123, pp.594-606, 2017. ,
URL : https://hal.archives-ouvertes.fr/hal-01818488
A new role for sulfur in arsenic cycling, Environ. Sci. Technol, vol.42, pp.81-85, 2008. ,
Continuous bioscorodite crystallization in CSTRs for arsenic removal and disposal, Water Res, vol.46, pp.5883-5892, 2012. ,
Geomicrobiology of la zarza-perrunal acid mine effluent, Spain). Appl. Environ. Microbiol, vol.77, pp.2685-2694, 2011. ,
Efficient low-pH Iron removal by a microbial Iron oxide mound ecosystem at scalp level run, Appl. Environ. Microbiol, vol.83, pp.15-17, 2017. ,
Macroscopic streamer growths in acidic, metal-rich mine waters in north wales consist of novel and remarkably simple bacterial communities, Appl. Environ. Microbiol, vol.72, pp.2022-2030, 2006. ,
The genus Gallionella, The Prokaryotes, pp.990-995, 2006. ,
A modular continuous flow reactor system for the selective bio-oxidation of iron and precipitation of schwertmannite from mine-impacted waters, Bioresour. Technol, vol.106, pp.44-49, 2012. ,
Remediation and selective recovery of metals from acidic mine waters using novel modular bioreactors, Environ. Sci. Technol, vol.48, pp.12206-12212, 2014. ,
DOI : 10.1021/es5030367
Schwertmannite formation adjacent to bacterial cells in a mine water treatment plant and in pure cultures of Ferrovum myxofaciens, Environ. Sci. Technol, vol.45, pp.7685-7692, 2011. ,
Bacterial diversity in a mine water treatment plant, Appl. Environ. Microbiol, vol.75, pp.858-861, 2009. ,
Population dynamics of Iron-oxidizing communities in pilot plants for the treatment of acid mine waters, Environ. Sci. Technol, vol.43, pp.6138-6144, 2009. ,
Life cycle assessment analysis of active and passive acid mine drainage treatment technologies, Resour. Conserv. Recycl, vol.86, pp.160-167, 2014. ,
Spatio-temporal detection of the thiomonas population and the thiomonas arsenite oxidase involved in natural arsenite attenuation processes in the carnoulès acid mine drainage, Front. Cell. Dev. Biol, vol.4, p.3, 2016. ,
Iron-catalyzed oxidation of Arsenic(III) by oxygen and by hydrogen peroxide: pH-dependent formation of oxidants in the fenton reaction, Environ. Sci. Technol, vol.37, pp.2734-2742, 2003. ,
Successional changes in bacterial assemblage structure during epilithic biofilm development, Ecology, vol.82, pp.555-566, 2001. ,
DOI : 10.2307/2679879
Uncovering a microbial enigma: isolation and characterization of the streamer-generating, ironoxidizing, acidophilic bacterium "Ferrovum myxofaciens, Appl. Environ. Microbiol, vol.80, pp.672-680, 2014. ,
Redox transformations of Iron at extremely low pH: fundamental and applied aspects, Front. Microbiol, vol.3, p.96, 2012. ,
Geochemical niches of Iron-oxidizing acidophiles in acidic coal mine drainage, Appl. Environ. Microbiol, vol.81, pp.1242-1250, 2015. ,
Novel microbial assemblages dominate weathered sulfidebearing rock from copper-nickel deposits in the duluth complex, Appl. Environ. Microbiol, vol.83, pp.909-926, 2017. ,
Acid mine water treatment using novel acidophilic iron-oxidizing bacteria of the genus "Ferrovum": effect of oxygen and carbon dioxide on survival, Proceedings of the IMWA 2016, pp.1060-1063, 2016. ,
Contemporary environmental variation determines microbial diversity patterns in acid mine drainage, ISME J, vol.7, pp.1038-1050, 2013. ,
DOI : 10.1038/ismej.2012.139
URL : https://www.nature.com/articles/ismej2012139.pdf
Bacterial oxidation of ferrous iron at low temperatures, Biotechnol. Bioeng, vol.97, pp.1470-1478, 2007. ,
DOI : 10.1002/bit.21371
Ecologically meaningful transformations for ordination of species data, Oecologia, vol.129, pp.271-280, 2001. ,
DOI : 10.1007/s004420100716
Bacterial community succession in natural river biofilm assemblages, Microb. Ecol, vol.50, pp.589-601, 2005. ,
Natural pretreatment and passive remediation of highly polluted acid mine drainage, J. Environ. Manage, vol.104, pp.93-100, 2012. ,
FLASH: fast length adjustment of short reads to improve genome assemblies, Bioinformatics, vol.27, pp.2957-2963, 2011. ,
Microbial diversity and metabolic networks in acid mine drainage habitats, Front. Microbiol, vol.6, p.475, 2015. ,
Novel electrochemicalenzymatic model which quantifies the effect of the solution Eh on the kinetics of ferrous iron oxidation with Acidithiobacillus ferrooxidans, Biotechnol. Bioeng, vol.80, pp.280-288, 2002. ,
Proteome changes in the initial bacterial colonist during ecological succession in an acid mine drainage biofilm community, Environ. Microbiol, vol.13, pp.2279-2292, 2011. ,
Acidophilic bacteria and their activity in mineral sulfide oxidation, Microbial Mineral Recovery, pp.3-27, 1990. ,
Arsenic geochemistry of acid mine drainage. Mine Water Environ, vol.34, pp.181-196, 2015. ,
DOI : 10.1007/s10230-014-0286-4
Reasons why 'Leptospirillum'-like species rather than Thiobacillus ferrooxidans are the dominant iron-oxidizing bacteria in many commercial processes for the biooxidation of pyrite and related ores, Microbiology (Reading, Engl.), vol.145, pp.5-13, 1999. ,
Comparison of ferric iron generation by different species of acidophilic bacteria immobilized in packed-bed reactors, Syst. Appl. Microbiol, vol.31, pp.68-77, 2008. ,
Structural and functional dynamics of sulfate-reducing populations in bacterial biofilms, Appl. Environ. Microbiol, vol.64, pp.3731-3739, 1998. ,
Introducing mothur: open-source, platform-independent, community-supported software for describing and comparing microbial communities, Appl. Environ. Microbiol, vol.75, pp.7537-7541, 2009. ,
Geochemical and temporal influences on the enrichment of acidophilic iron-oxidizing bacterial communities, Appl. Environ. Microbiol, vol.82, pp.3611-3621, 2016. ,
Remediation of antimony-rich mine waters: assessment of antimony removal and shifts in the microbial community of an onsite field-scale bioreactor, Environ. Pollut, vol.215, pp.213-222, 2016. ,
Temperature and nutrients as drivers of microbially mediated arsenic oxidation and removal from acid mine drainage, Appl. Microbiol. Biotechnol, vol.102, pp.2413-2424, 2018. ,
URL : https://hal.archives-ouvertes.fr/hal-02110146
Bench-scale study of the effect of phosphate on an aerobic iron oxidation plant for mine water treatment, Water Res, vol.48, pp.345-353, 2014. ,
Diversity and spatiotemporal dynamics of bacterial communities: physicochemical and other drivers along an acid mine drainage, FEMS Microbiol. Ecol, vol.90, pp.247-263, 2014. ,
URL : https://hal.archives-ouvertes.fr/hal-01631848
Adsorption of Thiobacillus ferrooxidans cells on solid surfaces and its effect on iron release from pyrite, J. Gen. Appl. Microbiol, vol.30, pp.63-77, 1984. ,
Optimizing fluorescent in situ hybridization with rRNA-targeted oligonucleotide probes for flow cytometric identification of microorganisms, Cytometry, vol.14, pp.136-143, 1993. ,
Naïve bayesian classifier for rapid assignment of rRNA sequences into the new bacterial taxonomy, Appl. Environ. Microbiol, vol.73, pp.5261-5267, 2007. ,
Conservative fragments in bacterial 16S rRNA genes and primer design for 16S ribosomal DNA amplicons in metagenomic studies, PLoS One, vol.4, p.7401, 2009. ,
Sulfuriferula multivorans gen. nov., sp. nov., isolated from a freshwater lake, reclassification of "Thiobacillus plumbophilus" as Sulfuriferula plumbophilus sp. nov., and description of Sulfuricellaceae fam. nov. and Sulfuricellales ord. nov, Int. J. Syst. Evol. Microbiol, vol.65, pp.1504-1508, 2015. ,
Characterization of neutrophilic Fe(II)-oxidizing bacteria isolated from the rhizosphere of wetland plants and description of Ferritrophicum radicicola gen. nov. sp. nov., and Sideroxydans paludicola sp. nov, Geomicrobiol. J, vol.24, pp.559-570, 2007. ,
Chemical behaviour of the Wheal Jane bioremediation system, Sci. Total Environ, vol.338, pp.41-51, 2005. ,
Natural acidophilic biofilm communities reflect distinct organismal and functional organization, ISME J, vol.3, pp.266-270, 2009. ,
Biofilm community succession: a neutral perspective, Microbiology, 2017. ,
Oxygen-dependent niche formation of a pyrite-dependent acidophilic consortium built by archaea and bacteria, ISME J, vol.7, pp.1725-1737, 2013. ,