Skeletal organic matrices in molluscs: origin, evolution, diagenesis

Frédéric Marin (1) , Aurélien Chmiel , Takeshi Takeuchi (2) , Irina Bundeleva (1) , Christophe Durlet (1) , Elias Samankassou (3) , Davorin Medakovic (4)

1 BGS - Biogéosciences [UMR 6282]
2 Marine Genomics Unit
3 Department of Earth Sciences [Geneva]
4 Center for Marine Research Rovinj

The mollusc shell comprises a small amount of organic macromolecules, mostly proteins and polysaccharides, which, all together, constitute the skeletal organic matrix (SOM). In the recent years, the study of the SOM of about two dozens of mollusc species via transcriptomics and/or proteomics has led to the identification of hundreds of shell-associated proteins. This rapidly growing set of data allows several comparisons, shedding light on similarities and differences at the primary structure level and on some peculiar evolutionary mechanisms that may have affected SOM proteins. In addition, it constitutes a prerequisite for investigating the SOM repertoires of sub-fossils or fossil specimens, closely related to known extant species, in order to revisit diagenetic processes, i.e. how SOM proteins degrade during fossilization. These two aspects are briefly exemplified here: on the one hand, Aplysia californica, the sea hare, exhibits a vestigial internal shell that has kept a proteomic signature similar to that found in fully functional external shells. On the other hand, subfossil specimens of the giant clam Tridacna, collected in French Polynesia, precisely dated and analysed by proteomics for their SOM content, comprise several preserved proteins that can still be identified by their peptide signature, in spite of information losses likely due to diagenetic transformations.

Mots clés: Mollusc; Shell; Proteomics; Protein; Sequences; Functional domains; Diagenesis

Domaines: Biochimie [q-bio.BM]

Frédéric Marin, Aurélien Chmiel, Takeshi Takeuchi, Irina Bundeleva, Christophe Durlet, et al.. Skeletal organic matrices in molluscs: origin, evolution, diagenesis. 14th International Symposium on Biomineralization, Oct 2017, Tsukuba, Japan. pp.325-334, ⟨10.1007/978-981-13-1002-7_34⟩. ⟨hal-01895413⟩