Big Data: Astronomical or Genomical?, PLOS Biology, vol.28, issue.7, pp.13-1002195 ,
DOI : 10.1371/journal.pbio.1002195.s006
URL : https://doi.org/10.1371/journal.pbio.1002195
Bio2RDF release 2: Improved coverage, interoperability and provenance of life science linked data. In The semantic web: semantics and big data, pp.200-212, 2013. ,
BioPortal: ontologies and integrated data resources at the click of a mouse, Nucleic Acids Research, vol.36, issue.suppl_2, p.440, 2009. ,
DOI : 10.1093/nar/gkn317
URL : https://hal.archives-ouvertes.fr/hal-00492020
Modeling sample variables with an Experimental Factor Ontology, Bioinformatics, vol.11, issue.8, pp.261112-1118, 2010. ,
DOI : 10.1017/S0269888900007797
URL : https://hal.archives-ouvertes.fr/hal-00721833
EDAM: an ontology of bioinformatics operations, types of data and identifiers, topics and formats, Bioinformatics, vol.29, issue.5, pp.291325-1332, 2013. ,
DOI : 10.1038/nbt.1823
Micropublications: a semantic model for claims, evidence, arguments and annotations in biomedical communications, Journal of Biomedical Semantics, vol.5, issue.1, pp.1-33, 2014. ,
DOI : 10.1186/2041-1480-5-28
Differential gene and transcript expression analysis of RNA-seq experiments with TopHat and Cufflinks, Nature Protocols, vol.7, issue.3, pp.562-578, 2012. ,
DOI : 10.1038/nbt0710-691
Linked Data - The Story So Far, International Journal on Semantic Web and Information Systems, vol.5, issue.3, pp.1-22, 2009. ,
DOI : 10.4018/jswis.2009081901
URL : https://eprints.soton.ac.uk/271285/1/bizer-heath-berners-lee-ijswis-linked-data.pdf
Workflow patterns. Distributed and Parallel Databases, pp.5-51, 2003. ,
Towards scientific workflow patterns, Proceedings of the 4th Workshop on Workflows in Support of Large-Scale Science, WORKS '09, p.13, 2009. ,
DOI : 10.1145/1645164.1645177
Augmenting prov with plans in p-plan: Scientific processes as linked data, Second International Workshop on Linked Science: Tackling Big Data (LISC), held in conjunction with the International Semantic Web Conference (ISWC), 2012. ,
Domain-specific summarization of Life-Science e-experiments from provenance traces, Life Science and e-Science, pp.19-30, 2014. ,
DOI : 10.1016/j.websem.2014.07.001
Provenance and Annotation of Data and Processes: 5th International Provenance and Annotation Workshop, pp.84-96, 2014. ,
ReproZip, Proceedings of the 2016 International Conference on Management of Data, SIGMOD '16 ,
DOI : 10.1109/MSP.2009.932122
Using a suite of ontologies for preserving workflow-centric research objects, Web Semantics: Science, Services and Agents on the World Wide Web, pp.16-42, 2015. ,
DOI : 10.1016/j.websem.2015.01.003
Common motifs in scientific workflows: An empirical analysis, Future Generation Computer Systems, vol.36, pp.338-351, 2014. ,
DOI : 10.1016/j.future.2013.09.018
URL : https://hal.archives-ouvertes.fr/hal-01342933