Dimensionality Reduction in spatio-temporal MaxEnt models and analysis of Retinal Ganglion Cell Spiking Activity in experiments

Abstract : Retinal spike response to stimuli is constrained, on one hand by short range correlations (receptive field overlap) and on the other hand by lateral connectivity (cells connectivity). This last effect is difficult to handle from statistics because it requires to consider spatio-temporal correlations with a time delay long enough to take into account the time of propagation along synapses. Although MaxEnt model are useful to fit optimal model (maximizing entropy) under the constraints of reproducing observed correlations, they do address spatio-temporal correlations in their classical form (Ising or higher order interactions but without time delay). Binning in such models somewhat integrates propagation effects, but in an implicit form, and increasing binning severely bias data [1]. To resolve this issue we have considered spatio-temporal MaxEnt model formerly developed e.g. by Vasquez et al. [2]. The price to pay, however is a huge set of parameters that must be fitted to experimental data to explain the observed spiking patterns statistics. There is no a priori knowledge of which parameters are relevant and which ones are contributing to overfitting. We propose here a method of dimension reduction, i.e. a projection on a relevant subset of parameters, relying on the so-called Susceptibility matrix closely related to the Fisher information. In contrast to standard methods in information geometry though, this matrix handle space and time correlations. We have applied this method for retina data obtained in a diurnal rodent (Octodon degus, having 30% of cones photoreceptors) and a 252-MEA system. Three types of stimuli were used: spatio-temporal uniform light, white noise and a natural movie. We show the role played by time-delayed pairwise interactions in the neural response to stimuli both for close and distant cells. Our conclusion is that, to explain the population spiking statistics we need both short-distance interactions as well as long-distance interactions, meaning that the relevant functional correlations are mediated not only by common input (i.e. receptive field overlap, electrical coupling; spillover) but also by long range connections.
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Submitted on : Saturday, October 8, 2016 - 12:58:06 PM
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Rubén Herzog, Maria-Jose Escobar, Adrian Palacios, Bruno Cessac. Dimensionality Reduction in spatio-temporal MaxEnt models and analysis of Retinal Ganglion Cell Spiking Activity in experiments. Bernstein Conference 2016 , Sep 2016, Berlin, Germany. ⟨hal-01377370⟩



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