Risk factors for calving assistance and dystocia in pasture-based Holstein???Friesian heifers and cows in Ireland, The Veterinary Journal, vol.187, issue.2, pp.189-94, 2011. ,
DOI : 10.1016/j.tvjl.2009.11.018
Effect of Stillbirths on Dam Survival and Reproduction Performance in Holstein Dairy Cows, Journal of Dairy Science, vol.90, issue.6, pp.2797-803, 2007. ,
DOI : 10.3168/jds.2006-504
Impacts of Dystocia on Health and Survival of Dairy Calves, Journal of Dairy Science, vol.90, issue.4, pp.1751-60, 2007. ,
DOI : 10.3168/jds.2006-295
Genetic parameters for calving difficulty, stillbirth, and birth weight for Hereford and Charolais at first and later parities, Journal of Animal Science, vol.82, issue.2, pp.375-83, 2004. ,
DOI : 10.2527/2004.822375x
Prevalence of, and risk factors associated with, perinatal calf mortality in pasture-based Holstein-Friesian cows, animal, vol.75, issue.04, pp.613-633, 2008. ,
DOI : 10.1016/j.theriogenology.2004.06.003
Genetic Effects on Stillbirth and Calving Difficulty in Swedish Holsteins at First and Second Calving, Journal of Dairy Science, vol.86, issue.6, pp.2228-2263, 2003. ,
DOI : 10.3168/jds.S0022-0302(03)73813-2
Phenotypic Trends in Incidence of Stillbirth for Holsteins in the United States, Journal of Dairy Science, vol.84, issue.2, pp.515-538, 2001. ,
DOI : 10.3168/jds.S0022-0302(01)74502-X
A Bayesian threshold-linear model evaluation of perinatal mortality, dystocia, birth weight, and gestation length in a Holstein herd1, Journal of Dairy Science, vol.94, issue.1, pp.450-60, 2011. ,
DOI : 10.3168/jds.2009-2992
Heterogeneity of Genetic Parameters for Calving Difficulty in Holstein Heifers in Ireland, Journal of Dairy Science, vol.90, issue.8, pp.3900-3908, 2007. ,
DOI : 10.3168/jds.2006-717
Genetic Architecture of Complex Traits and Accuracy of Genomic Prediction: Coat Colour, Milk-Fat Percentage, and Type in Holstein Cattle as Contrasting Model Traits, PLoS Genetics, vol.90, issue.107, p.1001139, 2010. ,
DOI : 10.1371/journal.pgen.1001139.s001
Distribution and location of genetic effects for dairy traits, Journal of Dairy Science, vol.92, issue.6, pp.2931-2977, 2009. ,
DOI : 10.3168/jds.2008-1762
A genome wide association study for QTL affecting direct and maternal effects of stillbirth and dystocia in cattle, Animal Genetics, vol.175, issue.3, pp.273-80, 2010. ,
DOI : 10.1111/j.1365-2052.2009.01998.x
Genome-wide association study for calving traits in Holstein???Friesian dairy cattle, animal, vol.79, issue.02, pp.224-259, 2014. ,
DOI : 10.3168/jds.S0022-0302(00)74942-3
Rapid and Accurate Haplotype Phasing and Missing-Data Inference for Whole-Genome Association Studies By Use of Localized Haplotype Clustering, The American Journal of Human Genetics, vol.81, issue.5, pp.1084-97, 2007. ,
DOI : 10.1086/521987
A Unified Approach to Genotype Imputation and Haplotype-Phase Inference for Large Data Sets of Trios and Unrelated Individuals, The American Journal of Human Genetics, vol.84, issue.2, pp.210-233, 2009. ,
DOI : 10.1016/j.ajhg.2009.01.005
WOMBAT???A tool for mixed model analyses in quantitative genetics by restricted maximum likelihood (REML), Journal of Zhejiang University SCIENCE B, vol.8, issue.11, pp.815-836, 2007. ,
DOI : 10.1631/jzus.2007.B0815
Deregressing estimated breeding values and weighting information for genomic regression analyses, Genetics Selection Evolution, vol.41, issue.1, p.55, 2009. ,
DOI : 10.1186/1297-9686-41-55
Genomic predictions in Angus cattle: Comparisons of sample size, response variables, and clustering methods for cross-validation, Journal of Animal Science, vol.92, issue.2, pp.485-97, 2014. ,
DOI : 10.2527/jas.2013-6757
Qvalue: Q-value estimation for false discovery rate control, 2004. ,
Extension of the bayesian alphabet for genomic selection, BMC Bioinformatics, vol.12, issue.1, p.186, 2011. ,
DOI : 10.3168/jds.2008-1514
Prediction of total genetic value using genome-wide dense marker maps, Genetics, vol.157, pp.1819-1848, 2001. ,
User manual for a portfolio of genomic selection related analyses, 2009. ,
Bayes Factors, Journal of the American Statistical Association, vol.2, issue.430, pp.773-95, 1995. ,
DOI : 10.1080/01621459.1995.10476572
The theory of probability, 1961. ,
Whole-genome sequencing of 234 bulls facilitates mapping of monogenic and complex traits in cattle, Nature Genetics, vol.132, issue.8, pp.858-65, 2014. ,
DOI : 10.3168/jds.2007-0980
URL : https://hal.archives-ouvertes.fr/hal-01193853
The placental growth factor (PGF) - a positional and functional candidate gene influencing calving ease and stillbirth in German dairy cattle, Animal Genetics, vol.70, issue.1, pp.22-29, 2011. ,
DOI : 10.1111/j.1365-2052.2010.02073.x
SIFT: predicting amino acid changes that affect protein function, Nucleic Acids Research, vol.31, issue.13, pp.3812-3816, 2003. ,
DOI : 10.1093/nar/gkg509
A method and server for predicting damaging missense mutations, Nature Methods, vol.7, issue.4, pp.248-257, 2010. ,
DOI : 10.1038/nmeth0410-248
Genome-wide association study for calving traits in Danish and Swedish Holstein cattle, Journal of Dairy Science, vol.94, issue.1, pp.479-86, 2011. ,
DOI : 10.3168/jds.2010-3381
Population level genome-wide association study for calving traits in Holstein cattle, Proceedings of the 64 th Annual Meeting of the European Association of Animal Science, pp.26-30, 2013. ,
Using SIFT and PolyPhen to Predict Loss-of-Function and Gain-of-Function Mutations, Genetic Testing and Molecular Biomarkers, vol.14, issue.4, pp.533-540, 2010. ,
DOI : 10.1089/gtmb.2010.0036
The conserved Wobble uridine tRNA thiolase Ctu1-Ctu2 is required to maintain genome integrity, Proceedings of the National Academy of Sciences, vol.105, issue.14, pp.5459-64, 2008. ,
DOI : 10.1073/pnas.0709404105
Quantitative analysis of birth, weaning, and yearling weights and calving difficulty in Piedmontese crossbreds segregating an inactive myostatin allele., Journal of Animal Science, vol.77, issue.7, pp.1686-92, 1999. ,
DOI : 10.2527/1999.7771686x
Detection of signatures of selective sweeps in the Blonde d'Aquitaine cattle breed, Animal Genetics, vol.10, issue.5, pp.579-83, 2013. ,
DOI : 10.1111/age.12042
URL : https://hal.archives-ouvertes.fr/hal-01001546
Whole Genome Scan to Detect Quantitative Trait Loci for Conformation and Functional Traits in Dairy Cattle, Journal of Dairy Science, vol.83, issue.4, pp.795-806, 2000. ,
DOI : 10.3168/jds.S0022-0302(00)74942-3
Putative quantitative trait locus affecting birth weight on bovine chromosome 2., Journal of Animal Science, vol.79, issue.1, pp.68-72, 2001. ,
DOI : 10.2527/2001.79168x
Gene structure and genetic localization of the PCLO gene encoding the presynaptic active zone protein Piccolo, International Journal of Developmental Neuroscience, vol.20, issue.3-5, pp.161-71, 2002. ,
DOI : 10.1016/S0736-5748(02)00046-1
A genome scan for quantitative trait loci influencing carcass, post-natal growth and reproductive traits in commercial Angus cattle, Animal Genetics, vol.28, issue.6, pp.597-607, 2010. ,
DOI : 10.1111/j.1365-2052.2010.02063.x
cDNA sequence and expression of bovine prodynorphin, Gene, vol.186, issue.2, pp.279-83, 1997. ,
DOI : 10.1016/S0378-1119(96)00721-4
Current attitudes of cattle practitioners to pain and the use of analgesics in cattle, Veterinary Record, vol.159, issue.20, pp.662-670, 2006. ,
DOI : 10.1136/vr.159.20.662
The Phosphate Transporter PiT1 (Slc20a1) Revealed As a New Essential Gene for Mouse Liver Development, PLoS ONE, vol.5, issue.2, p.9148, 2010. ,
DOI : 10.1371/journal.pone.0009148.s009
Cerebral hypoplasia and craniofacial defects in mice lacking heparan sulfate Ndst1 gene function, Development, vol.132, issue.16, pp.3777-86, 2005. ,
DOI : 10.1242/dev.01935
Accuracy of genomic breeding values in multi-breed dairy cattle populations, Genetics Selection Evolution, vol.41, issue.1, p.51, 2009. ,
DOI : 10.1186/1297-9686-41-51