Phenotyping pipeline reveals major seedling root growth QTL in hexaploid wheat

Abstract : Seedling root traits of wheat (Triticum aestivum L.) have been shown to be important for efficient establishment and linked to mature plant traits such as height and yield. A root phenotyping pipeline, consisting of a germination paper-based screen combined with image segmentation and analysis software, was developed and used to characterize seedling traits in 94 doubled haploid progeny derived from a cross between the winter wheat cultivars Rialto and Savannah. Field experiments were conducted to measure mature plant height, grain yield, and nitrogen (N) uptake in three sites over 2 years. In total, 29 quantitative trait loci (QTLs) for seedling root traits were identified. Two QTLs for grain yield and N uptake co-localize with root QTLs on chromosomes 2B and 7D, respectively. Of the 29 root QTLs identified, 11 were found to co-localize on 6D, with four of these achieving highly significant logarithm of odds scores (>20). These results suggest the presence of a major-effect gene regulating seedling root vigour/growth on chromosome 6D.
Document type :
Journal articles
Complete list of metadatas

https://hal.archives-ouvertes.fr/hal-01245197
Contributor : Archive Ouverte Prodinra <>
Submitted on : Wednesday, December 16, 2015 - 8:16:04 PM
Last modification on : Thursday, December 17, 2015 - 1:05:51 AM

Links full text

Identifiers

Collections

Citation

Jonathan A Atkinson, Luzie U Wingen, Marcus Griffiths, Michael P Pound, Oorbessy Gaju, et al.. Phenotyping pipeline reveals major seedling root growth QTL in hexaploid wheat. Journal of experimental botany, 2015, 66 (8), pp.2283-2292. ⟨10.1093/jxb/erv006⟩. ⟨hal-01245197⟩

Share

Metrics

Record views

225