Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing

Areski Flissi 1, 2 Yoann Dufresne 1, 2 Juraj Michalik 1 Laurie Tonon 1, 2 Stéphane Janot 1, 2 Laurent Noé 1, 2 Philippe Jacques 3 Valérie Leclère 1, 2, 3 Maude Pupin 1, 2
2 BONSAI - Bioinformatics and Sequence Analysis
Université de Lille, Sciences et Technologies, Inria Lille - Nord Europe, CRIStAL - Centre de Recherche en Informatique, Signal et Automatique de Lille - UMR 9189, CNRS - Centre National de la Recherche Scientifique
Abstract : Since its creation in 2006, Norine remains the unique knowledgebase dedicated to non-ribosomal pep-tides (NRPs). These secondary metabolites, produced by bacteria and fungi, harbor diverse interesting biological activities (such as antibiotic, anti-tumor, siderophore or surfactant) directly related to the diversity of their structures. The Norine team goal is to collect the NRPs and provide tools to analyze them efficiently. We have developed a user-friendly interface and dedicated tools to provide a complete bioinformatics platform. The knowledgebase gathers abundant and valuable annotations on more than 1100 NRPs. To increase the quantity of described NRPs and improve the quality of associated annotations , we are now opening Norine to crowdsourc-ing. We believe that contributors from the scientific community are the best experts to annotate the NRPs they work on. We have developed MyNorine to facilitate the submission of new NRPs or modifications of stored ones. This article presents MyNorine and other novelties of Norine interface released since the first publication. Norine is freely accessible from the following URL: http://bioinfo.lifl.fr/NRP.
Type de document :
Article dans une revue
Nucleic Acids Research, Oxford University Press (OUP): Policy C - Option B, 2015, 〈10.1093/nar/gkv1143〉
Liste complète des métadonnées

Littérature citée [19 références]  Voir  Masquer  Télécharger

https://hal.archives-ouvertes.fr/hal-01235996
Contributeur : Areski Flissi <>
Soumis le : mardi 1 décembre 2015 - 10:28:54
Dernière modification le : jeudi 7 janvier 2016 - 16:50:14
Document(s) archivé(s) le : mercredi 2 mars 2016 - 11:22:36

Fichier

Nucl. Acids Res.-2015-Flissi-n...
Fichiers éditeurs autorisés sur une archive ouverte

Identifiants

Citation

Areski Flissi, Yoann Dufresne, Juraj Michalik, Laurie Tonon, Stéphane Janot, et al.. Norine, the knowledgebase dedicated to non-ribosomal peptides, is now open to crowdsourcing. Nucleic Acids Research, Oxford University Press (OUP): Policy C - Option B, 2015, 〈10.1093/nar/gkv1143〉. 〈hal-01235996〉

Partager

Métriques

Consultations de
la notice

269

Téléchargements du document

118