E. Scallan, P. M. Griffin, F. J. Angulo, R. V. Tauxe, and R. M. Hoekstra, Foodborne illness acquired in the United States-unspecified agents, 2011.

. Emerg, Infect. Dis, vol.17, pp.16-22

R. L. Scharff, Economic burden from health losses due to foodborne illness in the United States, J. Food Prot, vol.75, pp.123-131, 2012.

, The European Union summary report on trends and sources of zoonoses, zoonotic agents and food-borne outbreaks in 2012, EFSA J, vol.12, p.3547, 2014.

M. S. Bergdoll, Staphylococcus aureus, Foodborne bacterial pathogens. Marcel Dekker, pp.463-523, 1989.

S. Zahoor and A. Bhatia, Bacteria: silent killers in food, Sci. Rep, pp.33-34, 2007.

L. Loir, Y. Baron, F. Gautier, and M. , Staphylococcus aureus and food poisoning, Genet. Mol. Res, vol.2, pp.63-76, 2003.
URL : https://hal.archives-ouvertes.fr/hal-01123026

A. Bhatia and S. Zahoor, Staphylococcus aureus enterotoxins: a review, J. Clin. Diagn. Res, vol.1, pp.188-197, 2007.

J. Schelin, N. Wallin-carlquist, M. T. Cohn, R. Lindqvist, G. C. Barker et al., The formation of Staphylococcus aureus enterotoxin in food environments and advances in risk assessment, Virulence, vol.2, pp.580-592, 2011.

A. Ostyn, D. Buyser, M. L. Guillier, F. Krys, S. Hennekinne et al., Benefits of the combined use of immunological and PCR-based methods for determination of staphylococcal enterotoxins food safety criteria in cheeses, Food Anal. Methods, vol.5, pp.173-178, 2011.

. Anonymous, Commission regulation (EC) no. 1441/2007 of 5 December 2007 amending regulation (EC) no. 2073/2005 on microbiological criteria for foodstuffs, Off. J. Eur. Union, vol.322, pp.12-29, 2007.

A. Kérouanton, J. A. Hennekinne, C. Letertre, L. Petit, O. Chesneau et al., Characterization of Staphylococcus aureus strains associated with food poisoning outbreaks in France, Int. J. Food Microbiol, vol.115, pp.369-375, 2007.

J. A. Hennekinne, D. Buyser, M. L. Dragacci, and S. , Staphylococcus aureus and its food poisoning toxins: characterization and outbreak investigation, FEMS Microbiol. Rev, vol.36, pp.815-836, 2012.

A. Gücükoglu, T. O. Kevenk, T. Uyanik, O. Cadirci, G. Terzi et al., Detection of enterotoxigenic Staphylococcus aureus in raw milk and dairy products by multiplex PCR, J. Food Sci, vol.77, pp.620-623, 2012.

A. Dambrosio, N. C. Quaglia, M. Saracino, M. Malcangi, C. Montagna et al., Microbiological quality of Burrata cheese produced in Puglia region: southern Italy, J. Food Prot, vol.76, 1981.

A. Pexara, N. Solomakos, D. Sergelidis, and A. Govaris, Fate of enterotoxigenic Staphylococcus aureus and staphylococcal enterotoxins in Feta and Galotyri cheeses, J. Dairy Res, vol.79, pp.405-413, 2012.

H. Lamprell, La production des entérotoxines dans les fromages en fonction de la diversité phénotypique et génétique des souches de Staphylococcus aureus, 2003.

E. Gómez-lucía, J. Goyache, J. A. Orden, A. Domenech, J. Hernandez et al., Growth of Staphylococcus aureus and synthesis of enterotoxin during ripening of experimental Manchego-type cheese, J. Dairy Sci, vol.75, pp.77733-77742, 1992.

K. W. Bayles and J. J. Iandolo, Genetic and molecular analyses of the gene encoding staphylococcal enterotoxin D, J. Bacteriol, vol.171, pp.4799-4806, 1989.

S. Zhang, J. J. Iandolo, and G. C. Stewart, The enterotoxin D plasmid of Staphylococcus aureus encodes a second enterotoxin determinant (sej), 1998.

, FEMS Microbiol. Lett, vol.168, pp.227-233

N. Balaban and A. Rasooly, Staphylococcal enterotoxins, Int. J. Food Microbiol, vol.61, pp.377-386, 2000.

A. L. Cheung, A. S. Bayer, G. Zhang, H. Gresham, and Y. Q. Xiong, Regulation of virulence determinants in vitro and in vivo in Staphylococcus aureus, FEMS Immunol. Med. Microbiol, vol.40, issue.03, pp.309-311, 2004.

A. Meyrand and C. Vernozy-rozand, Croissance et entérotoxinogenèse de Staphylococcus aureus dans différents fromages, Rev. Med. Vet, vol.150, pp.601-616, 1999.

D. Buyser, M. L. Dufour, B. , M. M. Lafarge, and V. , Implication of milk and milk products in food-borne diseases in France and in different industrialised countries, Int. J. Food Microbiol, vol.67, pp.443-446, 2001.

B. Ndoye, E. A. Rasolofo, G. Lapointe, and D. Roy, A review of the molecular approaches to investigate the diversity and activity of cheese microbiota, Dairy Sci. Technol, vol.91, pp.495-524, 2011.
URL : https://hal.archives-ouvertes.fr/hal-00930591

X. X. Zhou, Y. J. Pan, Y. B. Wang, and W. F. Li, Optimization of medium composition for nisin fermentation with response surface methodology, J. Food Sci, vol.73, pp.245-249, 2008.

Y. Liu-stratton, S. Roy, and C. K. Sen, DNA microarray technology in nutraceutical and food safety, Toxicol. Lett, vol.150, pp.29-42, 2004.

M. Cretenet, S. Nouaille, J. Thouin, L. Rault, L. Stenz et al., Staphylococcus aureus virulence and metabolism are dramatically affected by Lactococcus lactis in cheese matrix, Environ. Microbiol. Rep, vol.3, pp.340-351, 2011.
URL : https://hal.archives-ouvertes.fr/hal-01454330

J. L. Jany and G. Barbier, Culture-independent methods for identifying microbial communities in cheese, Food Microbiol, vol.25, pp.839-848, 2008.
URL : https://hal.archives-ouvertes.fr/hal-00561679

H. U. Graber, M. G. Casey, J. Naskova, A. Steiner, and W. Schaeren, Development of a highly sensitive and specific assay to detect Staphylococcus aureus in bovine mastitic milk, J. Dairy Sci, vol.90, pp.4661-4669, 2007.

V. M. Ulve, C. Monnet, F. Valence, J. Fauquant, H. Falentin et al., RNA extraction from cheese for analysis of in situ gene expression of Lactococcus lactis, J. Appl. Microbiol, vol.105, pp.1327-1333, 2008.
URL : https://hal.archives-ouvertes.fr/hal-01195424

M. Duquenne, I. Fleurot, M. Aigle, C. Darrigo, E. Borezee-durant et al., Tool for quantification of staphylococcal enterotoxin gene expression in cheese, Appl. Environ. Microbiol, vol.76, pp.1367-1374, 2010.
URL : https://hal.archives-ouvertes.fr/hal-02001274

D. Ercolini, P. J. Hill, and C. E. Dodd, Development of a fluorescence in situ hybridization method for cheese using a 16S rRNA probe, J. Microbiol. Methods, vol.52, pp.267-271, 2003.

S. Malic, K. E. Hill, A. Hayes, S. L. Percival, D. W. Thomas et al., Detection and identification of specific bacteria in wound biofilms using peptide nucleic acid fluorescent in situ hybridization (PNA FISH), Microbiology, vol.155, pp.2603-2611, 2009.

T. S. Lawson, R. E. Connally, S. Vemulpad, and J. A. Piper, Express fluorescence in situ hybridization methods for the detection of Staphylococcus aureus, Clin. Lab, vol.57, pp.789-794, 2011.

A. Gey, C. Werckenthin, S. Poppert, and R. K. Straubinger, Identification of pathogens in mastitis milk samples with fluorescent in situ hybridization, J. Vet. Diagn. Invest, vol.25, pp.386-394, 2013.

S. H. Yiu, A fluorescence microscopic study of cheese. Food Microstruct, vol.4, pp.99-106, 1985.

S. N. Marcellino and D. R. Benson, Scanning electron and light microscopic study of microbial succession on Bethlehem St. Nectaire cheese, Appl. Environ. Microbiol, vol.58, pp.3448-3454, 1992.

M. L. Parker, P. A. Gunning, A. C. Macedo, F. X. Malcata, and T. F. Brocklehurst, The microstructure and distribution of micro-organisms within mature Serra cheese, J. Appl. Microbiol, vol.84, pp.523-530, 1998.

D. Freitas, I. Pinon, N. Lopez, C. Thierry, A. Maubois et al., Microstructure, physicochemistry, microbial populations and aroma compounds of ripened Cantal cheeses, Lait, vol.85, pp.453-468, 2005.
URL : https://hal.archives-ouvertes.fr/hal-01453951

C. Lopez, M. B. Maillard, V. Briard-bion, B. Camier, and J. A. Hannon, Lipolysis during ripening of Emmental cheese considering organization of fat and preferential localization of bacteria, J. Agric. Food Chem, vol.54, pp.5855-5867, 2006.
URL : https://hal.archives-ouvertes.fr/hal-01453922

S. Jeanson, J. Chadoeuf, M. N. Madec, S. Aly, J. Floury et al., Spatial distribution of bacterial colonies in a model cheese, Appl. Environ. Microbiol, vol.77, pp.1493-1500, 2011.
URL : https://hal.archives-ouvertes.fr/hal-00730167

A. L. Cheung, C. C. Nast, and A. S. Bayer, Selective activation of sar promoters with the use of green fluorescent protein transcriptional fusions as the detection system in the rabbit endocarditis model, Infect. Immun, vol.66, pp.5988-5993, 1998.

B. C. Kahl, M. Goulian, W. Van-wamel, M. Herrmann, S. M. Simon et al., Staphylococcus aureus RN6390 replicates and induces apoptosis in a pulmonary epithelial cell line, Infect. Immun, vol.68, pp.5385-5392, 2000.

C. L. Malone, B. R. Boles, K. J. Lauderdale, M. Thoendel, J. S. Kavanaugh et al., Fluorescent reporters for Staphylococcus aureus, J. Microbiol. Methods, vol.77, pp.251-260, 2009.

J. M. Yarwood, D. J. Bartels, E. M. Volper, and E. P. Greenberg, Quorum sensing in Staphylococcus aureus biofilms, J. Bacteriol, vol.186, pp.1838-1850, 2004.

B. R. Boles and A. R. Horswill, Agr-mediated dispersal of Staphylococcus aureus biofilms, PLoS Pathog, vol.4, issue.4, 2008.

K. J. Lauderdale, C. L. Malone, B. R. Boles, J. Morcuende, and A. R. Horswill, Biofilm dispersal of community-associated methicillin-resistant Staphylococcus aureus on orthopedic implant material, J. Orthop. Res, vol.28, pp.55-61, 2010.

D. E. Moormeier, J. L. Endres, E. E. Mann, M. R. Sadykov, A. R. Horswill et al., Use of microfluidic technology to analyze gene expression during Staphylococcus aureus biofilm formation reveals distinct physiological niches, Appl. Environ. Microbiol, vol.79, pp.3413-3424, 2013.

J. A. Hennekinne, F. Guillier, S. Perelle, D. Buyser, M. L. Dragacci et al., Intralaboratory validation according to the EN ISO 16 140 standard of the Vidas SET2 detection kit for use in official controls of staphylococcal enterotoxins in milk products, J. Appl. Microbiol, vol.102, pp.1261-1272, 2007.

R. P. Novick, Staphylococcal plasmids and their replication, Annu. Rev. Microbiol, vol.43, pp.537-565, 1989.

D. G. Gibson, L. Young, R. Y. Chuang, J. C. Venter, C. A. Hutchison et al., Enzymatic assembly of DNA molecules up to several hundred kilobases, Nat. Methods, vol.6, pp.343-345, 2009.

B. N. Kreiswirth, S. Lofdahl, M. J. Betley, M. O'reilly, P. M. Schlievert et al., The toxic shock syndrome exotoxin structural gene is not detectably transmitted by a prophage, Nature, vol.305, pp.709-712, 1983.

S. Schenk and R. A. Laddaga, Improved method for electroporation of Staphylococcus aureus, FEMS Microbiol. Lett, vol.73, pp.133-138, 1992.

T. Hajjar, Y. Meng, G. Rajion, M. A. Vidyadaran, S. et al., Alterations in neuronal morphology and synaptophysin expression in the rat brain as a result of changes in dietary n-6:n-3 fatty acid ratios, Lipids Health Dis, vol.12, p.113, 2013.

J. K. Femling, W. M. Nauseef, and J. P. Weiss, Synergy between extracellular group IIA phospholipase A2 and phagocyte NADPH oxidase in digestion of phospholipids of Staphylococcus aureus ingested by human neutrophils, J. Immunol, vol.175, pp.4653-4661, 2005.

M. Cretenet, S. Even, L. Loir, and Y. , Unveiling Staphylococcus aureus enterotoxin production in dairy products: a review of recent advances to face new challenges, Dairy Sci. Technol, vol.91, pp.127-150, 2011.
URL : https://hal.archives-ouvertes.fr/hal-00930573

R. Maijala, H. Becker, J. A. Hennekinne, and A. Mantis, Opinion of the scientific committee on veterinary measures relating to public health on staphylococcal enterotoxins in milk products, particularly cheeses. European Commission Health & Consumer Protection Directorate-General, 2010.

C. Vernozy-rozand, A. Meyrand, C. Mazuy, M. L. Delignette-muller, G. Jaubert et al., Behaviour and enterotoxin production by Staphylococcus aureus during the manufacture and ripening of raw goats' milk lactic cheeses, J. Dairy Res, vol.65, pp.273-281, 1998.

L. Macaluso, C. Lapeyre, and S. Dragacci, Determination of influential factors during sample preparation for staphylococcal enterotoxin detection in dairy products, Analusis, vol.26, pp.300-304, 1998.

S. Consentino and F. Palmas, Hygienic conditions and microbial contamination in six ewe's-milk-processing plants in Sardinia, Italy. J. Food Prot, vol.60, pp.283-287, 1997.

M. A. Auty, G. E. Gardiner, S. J. Mcbrearty, E. O. O'sullivan, D. M. Mulvihill et al., Direct in situ viability assessment of bacteria in probiotic dairy products using viability staining in conjunction with confocal scanning laser microscopy, Appl. Environ. Microbiol, vol.67, pp.420-425, 2001.

K. Takeuchi and J. F. Frank, Confocal microscopy and microbial viability detection for food research, J. Food Prot, vol.64, pp.2088-2102, 2001.