N. Anten, R. Casado-garcia, and H. Nagashima, Effects of Mechanical Stress and Plant Density on Mechanical Characteristics, Growth, and Lifetime Reproduction of Tobacco Plants, The American Naturalist, vol.166, issue.6, pp.650-660, 2005.
DOI : 10.1086/497442

J. Arteca and R. Arteca, A multi-responsive gene encoding 1-aminocyclopropane-1-carboxylate synthase (ACS6) in mature Arabidopsis leaves, Plant Molecular Biology, vol.39, issue.2, pp.209-219, 1999.
DOI : 10.1023/A:1006177902093

W. Azri, C. Chambon, S. Herbette, N. Brunel, C. Coutand et al., Proteome analysis of apical and basal regions of poplar stems under gravitropic stimulation, Physiologia Plantarum, vol.128, issue.2, pp.193-208, 2009.
DOI : 10.1111/j.1399-3054.2009.01230.x

N. Boyer, Modification de la croissance de la tige de bryone (Bryonia dioica) a la suite d'irritations tactiles, Compte Rendu de l'acad emie des sciences de Paris, pp.2114-2117, 1967.

J. Braam and R. Davis, Rain-, wind-, and touch-induced expression of calmodulin and calmodulin-related genes in Arabidopsis, Cell, vol.60, issue.3, pp.357-364, 1990.
DOI : 10.1016/0092-8674(90)90587-5

S. Chang, J. Puryear, and J. Cairney, A simple and efficient method for isolating RNA from pine trees, Plant Molecular Biology Reporter, vol.197, issue.3, pp.113-116, 1993.
DOI : 10.1007/BF02670468

A. Cheung and H. Wu, THESEUS 1, FERONIA and relatives: a family of cell wall-sensing receptor kinases?, Current Opinion in Plant Biology, vol.14, issue.6, pp.632-641, 2011.
DOI : 10.1016/j.pbi.2011.09.001

S. Ciftci-yilmaz and R. Mittler, The zinc finger network of plants, Cellular and Molecular Life Sciences, vol.65, issue.7-8, pp.1150-1160, 2008.
DOI : 10.1007/s00018-007-7473-4

S. Ciftci-yilmaz, M. Morsy, L. Song, A. Coutu, B. Krizek et al., The EAR-motif of the Cys2/His2-type Zinc Finger Protein Zat7 Plays a Key Role in the Defense Response of Arabidopsis to Salinity Stress, Journal of Biological Chemistry, vol.282, issue.12, pp.9260-9268, 2007.
DOI : 10.1074/jbc.M611093200

C. Coutand, C. Dupraz, G. Jaouen, S. Ploquin, and B. Adam, Mechanical Stimuli Regulate the Allocation of Biomass in Trees: Demonstration with Young Prunus avium Trees, Annals of Botany, vol.101, issue.9, pp.1421-1432, 2008.
DOI : 10.1093/aob/mcn054
URL : https://hal.archives-ouvertes.fr/hal-01032056

C. Coutand, J. Julien, B. Moulia, J. Mauget, and D. Guitard, Biomechanical study of the effect of a controlled bending on tomato stem elongation: global mechanical analysis, Journal of Experimental Botany, vol.51, issue.352, pp.1813-1824, 2000.
DOI : 10.1093/jexbot/51.352.1813
URL : https://hal.archives-ouvertes.fr/hal-01189612

C. Coutand, L. Martin, N. Leblanc-fournier, M. Decourteix, J. Julien et al., Strain Mechanosensing Quantitatively Controls Diameter Growth and PtaZFP2 Gene Expression in Poplar, PLANT PHYSIOLOGY, vol.151, issue.1, pp.223-232, 2009.
DOI : 10.1104/pp.109.138164
URL : https://hal.archives-ouvertes.fr/hal-00964693

C. Coutand and B. Moulia, Biomechanical study of the effect of a controlled bending on tomato stem elongation: local strain sensing and spatial integration of the signal, Journal of Experimental Botany, vol.51, issue.352, pp.1825-1842, 2000.
DOI : 10.1093/jexbot/51.352.1825
URL : https://hal.archives-ouvertes.fr/hal-01189613

M. Curtis and U. Grossniklaus, A Gateway Cloning Vector Set for High-Throughput Functional Analysis of Genes in Planta, PLANT PHYSIOLOGY, vol.133, issue.2, pp.462-469, 2003.
DOI : 10.1104/pp.103.027979

S. Davletova, K. Schlauch, J. Coutu, and R. Mittler, The Zinc-Finger Protein Zat12 Plays a Central Role in Reactive Oxygen and Abiotic Stress Signaling in Arabidopsis, PLANT PHYSIOLOGY, vol.139, issue.2, pp.847-856, 2005.
DOI : 10.1104/pp.105.068254

D. Bem, L. Vincentz, and M. , Evolution of xyloglucan-related genes in green plants, BMC Evolutionary Biology, vol.10, p.341, 2010.

B. Devaiah, V. Nagarajan, and K. Raghothama, Phosphate Homeostasis and Root Development in Arabidopsis Are Synchronized by the Zinc Finger Transcription Factor ZAT6, PLANT PHYSIOLOGY, vol.145, issue.1, pp.147-159, 2007.
DOI : 10.1104/pp.107.101691

C. Englbrecht, H. Schoof, and S. Bohm, Conservation, diversification and expansion of C2H2 zinc finger proteins in the Arabidopsis thaliana genome, BMC Genomics, vol.5, issue.1, p.39, 2004.
DOI : 10.1186/1471-2164-5-39

J. Etchells and S. Turner, Orientation of vascular cell divisions in Arabidopsis, Plant Signaling & Behavior, vol.5, issue.6, pp.730-732, 2010.
DOI : 10.1186/1471-2229-8-1

Y. Ge, S. Dudoit, and T. Speed, Resampling-based multiple testing for microarray data analysis, Test, vol.82, issue.406, pp.1-77, 2003.
DOI : 10.1007/BF02595811

D. Gourcilleau, C. Lenne, C. Armenise, B. Moulia, J. Julien et al., Phylogenetic Study of Plant Q-type C2H2 Zinc Finger Proteins and Expression Analysis of Poplar Genes in Response to Osmotic, Cold and Mechanical Stresses, DNA Research, vol.18, issue.2, pp.77-92, 2011.
DOI : 10.1093/dnares/dsr001
URL : https://hal.archives-ouvertes.fr/hal-00842840

H. Guo, L. Li, H. Ye, X. Yu, A. Algreen et al., Three related receptor-like kinases are required for optimal cell elongation in Arabidopsis thaliana, Proceedings of the National Academy of Sciences, pp.7648-7653, 2009.
DOI : 10.1073/pnas.0812346106

O. Hamant, Widespread mechanosensing controls the structure behind the architecture in plants, Current Opinion in Plant Biology, vol.16, issue.5, pp.654-660, 2013.
DOI : 10.1016/j.pbi.2013.06.006

O. Hamant, M. Heisler, H. Jonsson, P. Krupinski, M. Uyttewaal et al., Developmental Patterning by Mechanical Signals in Arabidopsis, Science, vol.322, issue.5908, pp.1650-1655, 2008.
DOI : 10.1126/science.1165594
URL : https://hal.archives-ouvertes.fr/hal-00412612

M. Hermann, F. Maier, A. Masroor, S. Hirth, A. Pfitzner et al., The Arabidopsis NIMIN proteins affect NPR1 differentially, Frontiers in Plant Science, vol.4, p.88, 2013.
DOI : 10.3389/fpls.2013.00088

T. Humphrey, D. Bonetta, and D. Goring, Sentinels at the wall: cell wall receptors and sensors, New Phytologist, vol.14, issue.1, pp.7-21, 2007.
DOI : 10.1111/j.1469-8137.2007.02192.x

D. Ingber, Mechanical control of tissue growth: Function follows form, Proceedings of the National Academy of Sciences, pp.11571-11572, 2005.
DOI : 10.1073/pnas.0505939102

R. Irizarry, B. Hobbs, C. F. Beazer-barclay, Y. Antonellis, K. Scherf et al., Exploration, normalization, and summaries of high density oligonucleotide array probe level data, Biostatistics, vol.4, issue.2, pp.249-264, 2003.
DOI : 10.1093/biostatistics/4.2.249

M. Jaffe, Thigmomorphogenesis: The response of plant growth and development to mechanical stimulation, Planta, vol.174, issue.2, pp.143-157, 1973.
DOI : 10.1007/BF00387472

K. Kazan, Negative regulation of defence and stress genes by EAR-motif-containing repressors, Trends in Plant Science, vol.11, issue.3, pp.109-112, 2006.
DOI : 10.1016/j.tplants.2006.01.004

K. Kern, F. Ewers, F. Telewski, and L. Koehler, Mechanical perturbation affects conductivity, mechanical properties and aboveground biomass of hybrid poplars, Tree Physiology, vol.25, issue.10, pp.1243-1251, 2005.
DOI : 10.1093/treephys/25.10.1243

J. Kilian, D. Whitehead, J. Horak, D. Wanke, S. Weinl et al., The AtGenExpress global stress expression data set: protocols, evaluation and model data analysis of UV-B light, drought and cold stress responses, The Plant Journal, vol.14, issue.2, pp.347-363, 2007.
DOI : 10.1111/j.1365-313X.2007.03052.x

M. Knight, S. Smith, and A. Trewavas, Wind-induced plant motion immediately increases cytosolic calcium., Proceedings of the National Academy of Sciences, pp.4967-4971, 1992.
DOI : 10.1073/pnas.89.11.4967

K. Kodaira, F. Qin, L. Tran, K. Maruyama, S. Kidokoro et al., Arabidopsis Cys2/His2 Zinc-Finger Proteins AZF1 and AZF2 Negatively Regulate Abscisic Acid-Repressive and Auxin-Inducible Genes under Abiotic Stress Conditions, PLANT PHYSIOLOGY, vol.157, issue.2, pp.742-756, 2011.
DOI : 10.1104/pp.111.182683

K. Kubo, A. Sakamoto, A. Kobayashi, Z. Rybka, Y. Kanno et al., Cys2/His2 zinc-finger protein family of petunia: Evolution and general mechanism of target-sequence recognition, Nucleic Acids Research, vol.26, issue.2, pp.608-615, 1998.
DOI : 10.1093/nar/26.2.608

N. Leblanc-fournier, C. Coutand, J. Crouzet, N. Brunel, C. Lenne et al., Jr-ZFP2, encoding a Cys2/His2-type transcription factor, is Ó 2014 The Authors New Phytologist Ó www.newphytologist.com New involved in the early stages of the mechano-perception pathway and specifically expressed in mechanically stimulated tissues in woody plants, New Phytologist Trust New Phytologist Plant, Cell & Environment, vol.203, issue.31, pp.168-181, 2008.

D. Lee, D. Polisensky, and J. Braam, Genome-wide identification of touch- and darkness-regulated Arabidopsis genes: a focus on calmodulin-like and XTH genes, New Phytologist, vol.133, issue.2, pp.429-444, 2005.
DOI : 10.1111/j.1469-8137.2004.01238.x

J. Lepl-e, A. Brasileiro, M. Michel, F. Delmotte, and L. Jouanin, Transgenic poplars: expression of chimeric genes using four different constructs, Plant Cell Reports, vol.11, issue.3, pp.137-141, 1992.
DOI : 10.1007/BF00232166

J. Love, S. Bj?-orklund, J. Vahala, M. Hertzberg, J. Kangasj?-arvi et al., Ethylene is an endogenous stimulator of cell division in the cambial meristem of Populus, Proceedings of the National Academy of Sciences, pp.5984-5989, 2009.
DOI : 10.1073/pnas.0811660106

X. Luo, X. Bai, D. Zhu, Y. Li, J. W. Cai et al., GsZFP1, a new Cys2/His2-type zinc-finger protein, is a positive regulator of plant tolerance to cold and drought stress, Planta, vol.101, issue.6, pp.1141-1155, 2012.
DOI : 10.1007/s00425-011-1563-0

L. Martin, N. Leblanc-fournier, W. Azri, C. Lenne, C. Henry et al., Characterization and expression analysis under bending and other abiotic factors of PtaZFP2, a poplar gene encoding a Cys2/His2 zinc finger protein, Tree Physiology, vol.29, issue.1, pp.125-136, 2009.
DOI : 10.1093/treephys/tpn011
URL : https://hal.archives-ouvertes.fr/hal-01189327

L. Martin, N. Leblanc-fournier, J. Julien, B. Moulia, and C. Coutand, Acclimation kinetics of physiological and molecular responses of plants to multiple mechanical loadings, Journal of Experimental Botany, vol.61, issue.9, pp.2403-2412, 2010.
DOI : 10.1093/jxb/erq069
URL : https://hal.archives-ouvertes.fr/hal-00964862

S. Mcmaugh and B. Lyon, Real-time quantitative RT-PCR assay of gene expression in plant roots during fungal pathogenesis, BioTechniques, vol.34, pp.982-986, 2003.

G. Monshausen, T. Bibikova, M. Weisenseel, and S. Gilroy, Ca2+ Regulates Reactive Oxygen Species Production and pH during Mechanosensing in Arabidopsis Roots, THE PLANT CELL ONLINE, vol.21, issue.8, pp.2341-2356, 2009.
DOI : 10.1105/tpc.109.068395

G. Monshausen and S. Gilroy, Feeling green: mechanosensing in plants, Trends in Cell Biology, vol.19, issue.5, pp.228-235, 2009.
DOI : 10.1016/j.tcb.2009.02.005

G. Monshausen and E. Haswell, A force of nature: molecular mechanisms of mechanoperception in plants, Journal of Experimental Botany, vol.64, issue.15, pp.4663-4680, 2013.
DOI : 10.1093/jxb/ert204

J. Morizet and M. Mingeau, Effect of environment on water-uptake, as studied on beheaded exudating tomato. 1. Role of nutrients, Annales Agronomiques, vol.27, pp.183-205, 1976.

B. Moulia, C. Coutand, and C. Lenne, Posture control and skeletal mechanical acclimation in terrestrial plants: implications for mechanical modeling of plant architecture, American Journal of Botany, vol.93, issue.10, pp.1477-1489, 2006.
DOI : 10.3732/ajb.93.10.1477
URL : https://hal.archives-ouvertes.fr/hal-01189136

B. Moulia, D. Loughian, C. Bastien, R. Martin, L. Rodr-iguez et al., Integrative mechanobiology of growth and architectural development in changing mechanical environments, series: signaling and communication in plants, pp.269-302, 2011.

T. Murashige and F. Skoog, A Revised Medium for Rapid Growth and Bio Assays with Tobacco Tissue Cultures, Physiologia Plantarum, vol.7, issue.3, pp.473-492, 1962.
DOI : 10.1146/annurev.pp.02.060151.001311

J. Nilsson, A. Karlberg, H. Antti, M. Lopez-vernaza, E. Mellerowicz et al., Dissecting the Molecular Basis of the Regulation of Wood Formation by Auxin in Hybrid Aspen, THE PLANT CELL ONLINE, vol.20, issue.4, pp.843-855, 2008.
DOI : 10.1105/tpc.107.055798

N. Nishikubo, J. Takahashi, A. Roos, M. Derba-maceluch, K. Piens et al., Xyloglucan endo-Transglycosylase-Mediated Xyloglucan Rearrangements in Developing Wood of Hybrid Aspen, PLANT PHYSIOLOGY, vol.155, issue.1, pp.399-413, 2011.
DOI : 10.1104/pp.110.166934

M. Ohta, K. Matsui, K. Hiratsu, H. Shinshi, O. Takagi et al., Repression Domains of Class II ERF Transcriptional Repressors Share an Essential Motif for Active Repression, THE PLANT CELL ONLINE, vol.13, issue.8, pp.1959-1968, 2001.
DOI : 10.1105/tpc.13.8.1959

G. Potters, T. Pasternak, Y. Guisez, and M. Jansen, Different stresses, similar morphogenic responses: integrating a plethora of pathways, Plant, Cell & Environment, vol.54, issue.2, pp.158-169, 2009.
DOI : 10.1111/j.1365-3040.2008.01908.x

G. Potters, T. Pasternak, Y. Guisez, K. Palme, and M. Jansen, Stress-induced morphogenic responses: growing out of trouble?, Trends in Plant Science, vol.12, issue.3, pp.98-105, 2007.
DOI : 10.1016/j.tplants.2007.01.004

M. Pruyn, B. Ewers, and F. Telewski, Thigmomorphogenesis: changes in the morphology and mechanical properties of two Populus hybrids in response to mechanical perturbation, Tree Physiology, vol.20, issue.8, pp.535-540, 2000.
DOI : 10.1093/treephys/20.8.535

L. Rizhsky, S. Davletova, H. Liang, and R. Mittler, The Zinc Finger Protein Zat12 Is Required for Cytosolic Ascorbate Peroxidase 1 Expression during Oxidative Stress in Arabidopsis, Journal of Biological Chemistry, vol.279, issue.12, pp.11736-11743, 2004.
DOI : 10.1074/jbc.M313350200

M. Rodriguez, E. De-langre, and B. Moulia, A scaling law for the effects of architecture and allometry on tree vibration modes suggests a biological tuning to modal compartmentalization, American Journal of Botany, vol.95, issue.12, pp.1523-1537, 2008.
DOI : 10.3732/ajb.0800161
URL : https://hal.archives-ouvertes.fr/hal-00964853

P. Rushton, I. Somssich, P. Ringler, and Q. Shen, WRKY transcription factors, Trends in Plant Science, vol.15, issue.5, pp.247-258, 2010.
DOI : 10.1016/j.tplants.2010.02.006
URL : http://hdl.handle.net/11858/00-001M-0000-0012-3530-5

H. Sakamoto, K. Maruyama, Y. Sakuma, T. Meshi, M. Iwabuchi et al., Arabidopsis Cys2/His2-Type Zinc-Finger Proteins Function as Transcription Repressors under Drought, Cold, and High-Salinity Stress Conditions, PLANT PHYSIOLOGY, vol.136, issue.1, pp.2734-2746, 2004.
DOI : 10.1104/pp.104.046599

C. Schneider, W. Rasband, and K. Eliceiri, NIH Image to ImageJ: 25 years of image analysis, Nature Methods, vol.42, issue.7, pp.671-675, 2012.
DOI : 10.1038/nmeth.2089

M. Sistrunk, D. Antosiewicz, M. Purugganan, and J. Braam, Arabidopsis TCH3 Encodes a Novel Ca 2+ Binding Protein and Shows Environmentally Induced and Tissue-Specific Regulation, The Plant Cell, vol.6, issue.11, pp.1553-1565, 1994.
DOI : 10.2307/3869943

R. Stull, An introduction to boundary layer meteorology, 1988.
DOI : 10.1007/978-94-009-3027-8

S. Sun, S. Guo, X. Yang, Y. Bao, H. Tang et al., Functional analysis of a novel Cys2/His2-type zinc finger protein involved in salt tolerance in rice, Journal of Experimental Botany, vol.61, issue.10, pp.2807-2818, 2010.
DOI : 10.1093/jxb/erq120

F. Telewski, A unified hypothesis of mechanoperception in plants, American Journal of Botany, vol.93, issue.10, pp.1466-1476, 2006.
DOI : 10.3732/ajb.93.10.1466

F. Telewski and M. Jaffe, Thigmomorphogenesis: Field and laboratory studies of Abies fraseri in response to wind or mechanical perturbation, Physiologia Plantarum, vol.29, issue.2, pp.211-218, 1986.
DOI : 10.1016/0002-1571(73)90013-7

F. Telewski and M. Pruyn, Thigmomorphogenesis: a dose response to flexing in Ulmus americana seedlings, Tree Physiology, vol.18, issue.1, pp.65-68, 1998.
DOI : 10.1093/treephys/18.1.65

J. Vadassery, M. Reichelt, B. Hause, J. Gershenzon, and W. Boland, CML42-Mediated Calcium Signaling Coordinates Responses to Spodoptera Herbivory and Abiotic Stresses in Arabidopsis, PLANT PHYSIOLOGY, vol.159, issue.3, pp.1159-1175
DOI : 10.1104/pp.112.198150

F. Vandenbussche, I. Vaseva, K. Vissenberg, and D. Van-der-straeten, Ethylene in vegetative development: a tale with a riddle, New Phytologist, vol.150, issue.4, pp.895-909, 2012.
DOI : 10.1111/j.1469-8137.2012.04100.x

G. Vanzin, M. Madson, N. Carpita, N. Raikhel, K. Keegstra et al., The mur2 mutant of Arabidopsis thaliana lacks fucosylated xyloglucan because of a lesion in fucosyltransferase AtFUT1, Proceedings of the National Academy of Sciences, pp.3340-3345, 2002.
DOI : 10.1073/pnas.052450699

S. Voelker, B. Lachenbruch, F. Meinzer, and S. Strauss, Reduced wood stiffness and strength, and altered stem form, in young antisense 4CL transgenic poplars with reduced lignin contents, New Phytologist, vol.128, issue.4, pp.1096-1109, 2011.
DOI : 10.1111/j.1469-8137.2010.03572.x

J. Vogel, D. Zarka, V. Buskirk, H. Fowler, S. Thomashow et al., Roles of the CBF2 and ZAT12 transcription factors in configuring the low temperature transcriptome of Arabidopsis, The Plant Journal, vol.133, issue.2, pp.195-211, 2005.
DOI : 10.1111/j.1365-313X.2004.02288.x

W. Xu, M. Purugganan, D. Polisensky, D. Antosiewicz, S. Fry et al., Arabidopsis TCH4, Regulated by Hormones and the Environment, Encodes a Xyloglucan Endotransglycosylase, THE PLANT CELL ONLINE, vol.7, issue.10, pp.1555-1567, 1995.
DOI : 10.1105/tpc.7.10.1555

X. Xu, C. Chen, F. B. Chen, and Z. , Physical and Functional Interactions between Pathogen-Induced Arabidopsis WRKY18, WRKY40, and WRKY60 Transcription Factors, THE PLANT CELL ONLINE, vol.18, issue.5, pp.1310-1326, 2006.
DOI : 10.1105/tpc.105.037523
URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1456877

J. Zuo, Q. Niu, and N. Chua, An estrogen receptor-based transactivator XVE mediates highly inducible gene expression in transgenic plants, The Plant Journal, vol.15, issue.2, pp.265-273, 2000.
DOI : 10.1105/tpc.12.7.1137