K. Berkenbusch and A. A. Rowden, Factors influencing sediment turnover by the burrowing ghost shrimp Callianassa filholi (Decapoda: Thalassinidea), Journal of Experimental Marine Biology and Ecology, vol.238, issue.2, pp.283-292, 1999.
DOI : 10.1016/S0022-0981(99)00019-2

C. L. Biles, D. M. Paterson, R. B. Ford, M. Solan, and D. G. Raffaelli, Bioturbation, ecosystem functioning and community structure, Hydrology and Earth System Sciences, vol.6, issue.6, pp.999-1005, 2002.
DOI : 10.5194/hess-6-999-2002

URL : https://hal.archives-ouvertes.fr/hal-00304746

P. Bouchard, R. Chappaz, L. Cavalli, and G. Brun, (Linnaeus 1766), in the River Durance, South-east France, Annales de Limnologie - International Journal of Limnology, vol.34, issue.2, pp.193-200, 1998.
DOI : 10.1051/limn/1998018

J. R. Brett, Energetic responses of salmon to temperature. A study of some thermal relations in the physiology and freshwater ecology of sockeye salmon (Oncorhynchus nerka), 1971.

A. W. Breukelaar, E. H. Lammens, J. G. Breteler, and I. Ta´traita´trai, Effects of benthivorous bream (Abramis brama) and carp (Cyprinus carpio) on sediment resuspension and concentrations of nutrients and chlorophyll a, Freshwater Biology, vol.200, issue.1, pp.113-121, 1994.
DOI : 10.1016/0169-5347(92)90125-U

J. H. Brown, J. F. Gillooly, A. P. Allen, V. M. Savage, and G. B. West, TOWARD A METABOLIC THEORY OF ECOLOGY, Ecology, vol.85, issue.7, pp.1771-1789, 2004.
DOI : 10.1073/pnas.012579799

. Bubnova´rbubnova´r, G. Hello, P. Be´nardbe´nard, and J. Geleyn, Integration of the Fully Elastic Equations Cast in the Hydrostatic Pressure Terrain-Following Coordinate in the Framework of the ARPEGE/Aladin NWP System, Monthly Weather Review, vol.123, issue.2, pp.515-535, 1995.
DOI : 10.1175/1520-0493(1995)123<0515:IOTFEE>2.0.CO;2

L. Buisson, W. Thuiller, S. Lek, P. Lim, and G. Grenouillet, Climate change hastens the turnover of stream fish assemblages, Global Change Biology, vol.13, issue.10, pp.2232-2248, 2008.
DOI : 10.1111/j.1365-2486.2008.01657.x

URL : https://hal.archives-ouvertes.fr/halsde-00321185

D. R. Butler, The impact of climate change on patterns of zoogeomorphological influence: Examples from the Rocky Mountains of the Western U.S.A., Geomorphology, vol.157, issue.158, pp.157-158, 2012.
DOI : 10.1016/j.geomorph.2011.10.019

G. C. Cadeé, Sediment reworking by the polychaete heteromastus filiformis on a tidal flat in the Dutch Wadden Sea, Netherlands Journal of Sea Research, vol.13, issue.3-4, pp.441-456, 1979.
DOI : 10.1016/0077-7579(79)90017-6

S. Caradec, V. Grossi, S. Hulth, G. Stora, and F. Gilbert, Macrofaunal reworking activities and hydrocarbon redistribution in an experimental sediment system, Journal of Sea Research, vol.52, issue.3, pp.199-210, 2004.
DOI : 10.1016/j.seares.2004.02.002

URL : https://hal.archives-ouvertes.fr/hal-00757304

R. Chappaz, G. Brun, and G. Olivari, Donneés nouvelles sur la biologie et l'e´cologiee´cologie d'un poisson Cyprinide´peuCyprinide´peu e´tudie´Chondrostomae´tudie´ e´tudie´Chondrostoma toxostoma (Vallot 1936) Comparaison avec Chondrostoma nasus (L., 1766), C.R. Acad. Sci. Paris, vol.309, pp.181-186, 1989.

N. A. Cressie, Statistics for Spatial Data, Revised Edition., Biometrics, vol.50, issue.1, 1993.
DOI : 10.2307/2533238

D. Nada?¨-nada?¨-monoury, E. Lecerf, A. Canal, J. Buisson, L. Laffaille et al., A cost-effective method to quantify biological surface sediment reworking, Hydrobiologia, vol.36, issue.286, pp.115-125, 2013.
DOI : 10.1007/s10750-013-1497-6

D. Vries and P. , Salmonid influence on rivers: a geomorphic fish tail. Geomorphology, pp.157-158, 2012.

J. M. Elliott, Some aspects of thermal stress on freshwater teleosts, Stress and Fish, pp.209-245, 1981.

J. M. Elliott, M. A. Hurley, and J. D. Allonby, A functional model for maximum growth of immature stone loach, Barbatula barbatula, from three populations in north-west England, Freshwater Biology, vol.36, issue.3, pp.547-554, 1996.
DOI : 10.1046/j.1365-2427.1996.00110.x

A. S. Flecker, Ecosystem Engineering by a Dominant Detritivore in a Diverse Tropical Stream, Ecology, vol.77, issue.6, pp.1845-1854, 1996.
DOI : 10.2307/2265788

A. S. Flecker, Habitat Modification by Tropical Fishes: Environmental Heterogeneity and the Variability of Interaction Strength, Journal of the North American Benthological Society, vol.16, issue.1, pp.286-295, 1997.
DOI : 10.2307/1468258

A. S. Flecker and B. W. Taylor, TROPICAL FISHES AS BIOLOGICAL BULLDOZERS: DENSITY EFFECTS ON RESOURCE HETEROGENEITY AND SPECIES DIVERSITY, Ecology, vol.85, issue.8, pp.2267-2278, 2004.
DOI : 10.1007/s00442-002-0929-1

F. E. Fry, Effects of the environment on animal activity, University of Toronto Studies Biological Series Publ. Ontario Fisher. Res. Lab, vol.68, issue.55, pp.1-62, 1947.

F. Gilbert, S. Hulth, V. Grossi, J. Poggiale, G. Desrosiers et al., Sediment reworking by marine benthic species from the Gullmar Fjord (Western Sweden): Importance of faunal biovolume, Journal of Experimental Marine Biology and Ecology, vol.348, issue.1-2, pp.133-144, 2007.
DOI : 10.1016/j.jembe.2007.04.015

URL : https://hal.archives-ouvertes.fr/hal-00170982

J. F. Gillooly, J. H. Brown, G. B. West, V. M. Savage, and E. L. Charnov, Effects of Size and Temperature on Metabolic Rate, Science, vol.293, issue.5538, pp.2248-2251, 2001.
DOI : 10.1126/science.1061967

A. S. Gottesfeld, M. A. Hassan, J. F. Tunnicliffe, and R. W. Poirier, SEDIMENT DISPERSION IN SALMON SPAWNING STREAMS: THE INFLUENCE OF FLOODS AND SALMON REDD CONSTRUCTION, Journal of the American Water Resources Association, vol.14, issue.2007, pp.1071-1086, 2004.
DOI : 10.1139/cjfas-53-5-1061

R. E. Gozlan, Environmental biology and morphodynamics of the sofie Chondrostoma toxostoma (Cyprinidae), with emphasis on early development, 1998.

P. Greig-smith, The Use of Random and Contiguous Quadrats in the Study of the Structure of Plant Communities, Annals of Botany, vol.16, issue.2, 1952.
DOI : 10.1093/oxfordjournals.aob.a083317

A. R. Harborne, The ecology, behaviour and physiology of fishes on coral reef flats, and the potential impacts of climate change, Journal of Fish Biology, vol.63, issue.3, pp.417-447, 2013.
DOI : 10.1111/jfb.12203

E. S. Hathaway, The Relation of Temperature to the Quantity of Food Consumed by Fishes, Ecology, vol.8, issue.4, pp.428-434, 1927.
DOI : 10.2307/1930150

J. E. Heldman, J. S. Gunnarsson, G. Samuelsson, and F. Gilbert, Particle reworking and solute transport by the sediment-living polychaetes Marenzelleria neglecta and Hediste diversicolor, Journal of Experimental Marine Biology and Ecology, vol.407, issue.2, pp.294-301, 2011.
DOI : 10.1016/j.jembe.2011.06.026

J. M. Hellawell, The autecology of the chub, Squalius cephalus (L.), of the River Lugg and the Afon Llynfi., Freshwater Biology, vol.41, issue.4, pp.369-387, 1971.
DOI : 10.1111/j.1365-2427.1971.tb01569.x

R. J. Hijmans and J. Van-etten, Raster: Geographic data analysis and modeling. R package version 2, pp.1-16, 2013.

K. Hollertz and J. C. Duche?neduche?ne, Burrowing behavior and sediment reworking in the heart urchin Brissopsis lyrifera Forbes (Spatangoida), Mar. Biol, vol.139, pp.951-957, 2001.

G. W. Holtgrieve and D. E. Schindler, Marine-derived nutrients, bioturbation, and ecosystem metabolism: reconsidering the role of salmon in streams, Ecology, vol.32, issue.2, pp.373-385, 2010.
DOI : 10.1139/cjfas-55-6-1503

L. Horoszewicz, Lethal and 'disturbing' temperatures in some fish species from lakes with normal and artificially elevated temperature, Journal of Fish Biology, vol.28, issue.2, pp.165-181, 1973.
DOI : 10.1111/j.1095-8649.1973.tb04445.x

M. Huet, Profiles and Biology of Western European Streams as Related to Fish Management, Transactions of the American Fisheries Society, vol.88, issue.3, pp.155-163, 1959.
DOI : 10.1577/1548-8659(1959)88[155:PABOWE]2.0.CO;2

E. N. Ieno, M. Solan, P. Batty, and G. J. Pierce, How biodiversity affects ecosystem functioning: roles of infaunal species richness, identity and density in the marine benthos, Marine Ecology Progress Series, vol.311, pp.263-271, 2006.
DOI : 10.3354/meps311263

E. Jeppesen, M. Meerhoff, K. Holmgren, I. Gonzaíez-bergonzoni, F. T. Mello et al., Impacts of climate warming on lake fish community structure and potential effects on ecosystem function, Impacts of climate warming on lake fish community structure and potential effects on ecosystem function, pp.73-90, 2010.
DOI : 10.1007/s10750-010-0171-5

M. F. Johnson, S. P. Rice, and I. Reid, Topographic disturbance of subaqueous gravel substrates by signal crayfish (Pacifastacus leniusculus), Geomorphology, vol.123, issue.3-4, pp.269-278, 2010.
DOI : 10.1016/j.geomorph.2010.07.018

C. G. Jones, J. H. Lawton, and M. Shachak, Organisms as Ecosystem Engineers, Oikos, vol.69, issue.3, pp.373-386, 1994.
DOI : 10.2307/3545850

K. S. Kassahn, R. H. Crozier, H. O. Po¨rtnerpo¨rtner, and M. J. Caley, Animal performance and stress: responses and tolerance limits at different levels of biological organisation, Biological Reviews, vol.92, issue.2, pp.277-292, 2009.
DOI : 10.1111/j.1469-185X.2008.00073.x

M. Logez, P. Bady, and D. Pont, Modelling the habitat requirement of riverine fish species at the European scale: sensitivity to temperature and precipitation and associated uncertainty, Ecology of Freshwater Fish, vol.11, issue.2, pp.266-282, 2012.
DOI : 10.1111/j.1600-0633.2011.00545.x

J. F. Lo´pezlo´pez-olmeda and F. J. Sa´nchezsa´nchez-va´zquezva´zquez, Thermal biology of zebrafish (Danio rerio), Journal of Thermal Biology, vol.36, issue.2, pp.91-104, 2011.
DOI : 10.1016/j.jtherbio.2010.12.005

J. Lyons, J. S. Stewart, and M. Mitro, Predicted effects of climate warming on the distribution of 50 stream fishes in Wisconsin, U.S.A., Journal of Fish Biology, vol.131, issue.8, pp.1867-1898, 2010.
DOI : 10.1111/j.1095-8649.2010.02763.x

O. Maire, J. C. Duche?neduche?ne, A. Gremare, V. S. Malyuga, and F. J. Meysman, A comparison of sediment reworking rates by the surface deposit-feeding bivalve Abra ovata during summertime and wintertime, with a comparison between two models of sediment reworking, Journal of Experimental Marine Biology and Ecology, vol.343, issue.1, pp.21-36, 2007.
DOI : 10.1016/j.jembe.2006.10.052

URL : https://hal.archives-ouvertes.fr/hal-00133500

O. Maire, J. N. Merchant, M. Bulling, L. R. Teal, A. Gre´maregre´mare et al., Indirect effects of non-lethal predation on bivalve activity and sediment reworking, Journal of Experimental Marine Biology and Ecology, vol.395, issue.1-2, pp.30-36, 2010.
DOI : 10.1016/j.jembe.2010.08.004

R. H. Mann, Observations on the age, growth, reproduction and food of the chub Squalius cephalus (L.) in the River Stour, Dorset, Journal of Fish Biology, vol.5, issue.3, pp.265-288, 1976.
DOI : 10.1086/401873

P. Marmonier, G. Archambaud, N. Belaidi, N. Bougon, P. Breil et al., The role of organisms in hyporheic processes: gaps in current knowledge, needs for future research and applications, Annales de Limnologie - International Journal of Limnology, vol.48, issue.3, pp.253-266, 2012.
DOI : 10.1051/limn/2012009

URL : https://hal.archives-ouvertes.fr/halsde-00736087

S. S. Matsuzaki, N. Usio, N. Takamura, and I. Washitani, Contrasting impacts of invasive engineers on freshwater ecosystems: an experiment and meta-analysis, Oecologia, vol.9, issue.4, pp.673-686, 2009.
DOI : 10.1007/s00442-008-1180-1

D. R. Montgomery, J. M. Buffington, N. P. Peterson, D. Schuett-hames, and T. P. Quinn, Stream-bed scour, egg burial depths, and the influence of salmonid spawning on bed surface mobility and embryo survival, Canadian Journal of Fisheries and Aquatic Sciences, vol.53, issue.5, pp.1061-1070, 1996.
DOI : 10.1139/f96-028

F. Montserrat, C. Van-colen, P. Provoost, M. Milla, M. Ponti et al., Sediment segregation by biodiffusing bivalves, Estuarine, Coastal and Shelf Science, vol.83, issue.4, pp.379-391, 2009.
DOI : 10.1016/j.ecss.2009.04.010

J. W. Moore, Animal Ecosystem Engineers in Streams, BioScience, vol.56, issue.3, pp.237-246, 2006.
DOI : 10.1641/0006-3568(2006)056[0237:AEEIS]2.0.CO;2

J. W. Moore, D. E. Schindler, J. L. Carter, J. M. Fox, J. Griffiths et al., BIOTIC CONTROL OF STREAM FLUXES: SPAWNING SALMON DRIVE NUTRIENT AND MATTER EXPORT, Ecology, vol.88, issue.5, pp.1278-1291, 2007.
DOI : 10.1139/cjfas-56-9-1600

F. Orvain and P. Sauriau, Environmental and behavioural factors affecting activity in the intertidal gastropod Hydrobia ulvae, Journal of Experimental Marine Biology and Ecology, vol.272, issue.2, pp.191-216, 2002.
DOI : 10.1016/S0022-0981(02)00130-2

F. Orvain, P. G. Sauriau, A. Sygut, L. Joassard, L. Hir et al., Interacting effects of Hydrobia ulvae bioturbation and microphytobenthos on the erodibility of mudflat sediments, Marine Ecology Progress Series, vol.278, pp.205-223, 2004.
DOI : 10.3354/meps278205

D. Ouellette, G. Desrosiers, J. P. Gagne, F. Gilbert, J. C. Poggiale et al., Effects of temperature on in vitro sediment reworking processes by a gallery biodiffusor, the polychaete Neanthes virens, Marine Ecology Progress Series, vol.266, pp.185-193, 2004.
DOI : 10.3354/meps266185

URL : https://hal.archives-ouvertes.fr/hal-00758611

A. Persson and J. M. Svensson, Effects of benthivorous fish on biogeochemical processes in lake sediments, Freshwater Biology, vol.22, issue.7, pp.1298-1309, 2006.
DOI : 10.1034/j.1600-0706.2001.940215.x

A. Persson and J. M. Svensson, Vertical distribution of benthic community responses to fish predators, and effects on algae and suspended material, Aquatic Ecology, vol.94, issue.201, pp.85-95, 2006.
DOI : 10.1007/s10452-005-9014-2

D. P. Peterson and C. J. Foote, Disturbance of Small-Stream Habitat by Spawning Sockeye Salmon in Alaska, Transactions of the American Fisheries Society, vol.35, issue.4, pp.924-934, 2000.
DOI : 10.1577/1548-8675(1991)011<0339:SOMOSC>2.3.CO;2

A. G. Pledger, S. P. Rice, and J. Millett, Reduced bed material stability and increased bedload transport caused by foraging fish: a flume study with juvenile Barbel (Barbus barbus) Earth Surf, Proc. Land, pp.1500-1513, 2014.

C. M. Pringle, G. A. Blake, A. P. Covich, K. M. Buzby, and A. Finley, Effects of omnivorous shrimp in a montane tropical stream: sediment removal, disturbance of sessile invertebrates and enhancement of understory algal biomass, Oecologia, vol.19, issue.1, pp.1-11, 1993.
DOI : 10.1007/BF00321183

R. Development and C. Team, R: A Language and Environment for Statistical Computing. R Foundation for Statistical Computing, 2011.

K. Reise, Sediment mediated species interactions in coastal waters, Journal of Sea Research, vol.48, issue.2, pp.127-141, 2002.
DOI : 10.1016/S1385-1101(02)00150-8

F. C. Roozen, M. Lurling, H. Vlek, E. A. Kraan, B. W. Ibelings et al., Resuspension of algal cells by benthivorous fish boosts phytoplankton biomass and alters community structure in shallow lakes, Freshwater Biology, vol.136, issue.6, pp.977-987, 2007.
DOI : 10.1023/A:1017085129620

C. Scheirer, W. Ray, and N. Hare, The Analysis of Ranked Data Derived from Completely Randomized Factorial Designs, Biometrics, vol.32, issue.2, pp.429-434, 1976.
DOI : 10.2307/2529511

F. Sevault, S. Somot, A. Alias, C. Dubois, C. Lebeaupin-brossier et al., A fully coupled Mediterranean regional climate system model: design and evaluation of the ocean component for the, p.23967, 1980.

H. Shirakawa, S. Yanai, and A. Goto, Lamprey larvae as ecosystem engineers: physical and geochemical impact on the streambed by their burrowing behavior, Hydrobiologia, vol.382, issue.1, pp.313-322, 2013.
DOI : 10.1007/s10750-012-1293-8

Y. Souchon and L. Tissot, Synthesis of thermal tolerances of the common freshwater fish species in large Western Europe rivers, Knowledge and Management of Aquatic Ecosystems, vol.405, issue.405, p.3, 2012.
DOI : 10.1051/kmae/2012008

URL : https://hal.archives-ouvertes.fr/hal-00783683

B. Statzner, Geomorphological implications of engineering bed sediments by lotic animals, Geomorphology, vol.157, issue.158, pp.157-158, 2012.
DOI : 10.1016/j.geomorph.2011.03.022

URL : https://hal.archives-ouvertes.fr/halsde-00768023

B. Statzner and O. Peltret, Assessing potential abiotic and biotic complications of crayfish-induced gravel transport in experimental streams, Geomorphology, vol.74, issue.1-4, pp.245-256, 2006.
DOI : 10.1016/j.geomorph.2005.08.007

URL : https://hal.archives-ouvertes.fr/halsde-00150497

B. Statzner and P. Sagnes, Crayfish and fish as bioturbators of streambed sediments: Assessing joint effects of species with different mechanistic abilities, Geomorphology, vol.93, issue.3-4, pp.267-287, 2008.
DOI : 10.1016/j.geomorph.2007.02.019

URL : https://hal.archives-ouvertes.fr/halsde-00239212

B. Statzner, E. Fiè, J. Champagne, R. Morel, and E. Herouin, Crayfish as geomorphic agents and ecosystem engineers: Biological behavior affects sand and gravel erosion in experimental streams, Limnology and Oceanography, vol.45, issue.5, pp.1030-1040, 2000.
DOI : 10.4319/lo.2000.45.5.1030

B. Statzner, O. Peltret, and S. Tomanova, Crayfish as geomorphic agents and ecosystem engineers: effect of a biomass gradient on baseflow and flood-induced transport of gravel and sand in experimental streams, Freshwater Biology, vol.43, issue.1, pp.147-163, 2003.
DOI : 10.1046/j.1365-2427.1996.00132.x

B. Statzner, P. Sagnes, J. Champagne, and S. Viboud, Contribution of benthic fish to the patch dynamics of gravel and sand transport in streams, Water Resources Research, vol.303, issue.10, pp.1-17, 2003.
DOI : 10.1029/2003WR002270

D. S. White, P. C. Klahr, and J. A. Robbins, Effects of Temperature and Density on Sediment Reworking by Stylodrilus Heringianus (Oligochaeta: Lumbriculidae), Journal of Great Lakes Research, vol.13, issue.2, pp.147-156, 1987.
DOI : 10.1016/S0380-1330(87)71638-4

L. Zhang, Q. Liao, W. He, J. Shang, and C. Fan, The effects of temperature on oxygen uptake and nutrient flux in sediment inhabited by molluscs, Journal of Limnology, vol.72, issue.1, pp.13-20, 2013.
DOI : 10.4081/jlimnol.2013.e2

L. Zhang, J. Shang, W. He, B. You, and C. Fan, ) in sediment resuspension: a microcosm study, Annales de Limnologie - International Journal of Limnology, vol.50, issue.3, pp.253-260, 2014.
DOI : 10.1051/limn/2014013

Y. Zhang, J. S. Richardson, and J. N. Negishi, Detritus processing, ecosystem engineering and benthic diversity: a test of predator-omnivore interference, Journal of Animal Ecology, vol.92, issue.4, pp.756-766, 2004.
DOI : 10.1098/rspb.2003.2478