J. Gardy, J. Johnston, S. Sui, V. Cook, L. Shah et al., Whole-Genome Sequencing and Social-Network Analysis of a Tuberculosis Outbreak, New England Journal of Medicine, vol.364, issue.8, pp.730-739, 2011.
DOI : 10.1056/NEJMoa1003176

M. Salathé, M. Kazandjieva, J. Lee, P. Levis, M. Feldman et al., A high-resolution human contact network for infectious disease transmission, Proceedings of the National Academy of Sciences, vol.107, issue.51, pp.22020-22025, 2010.
DOI : 10.1073/pnas.1009094108

C. Cattuto, W. Van-den-broeck, A. Barrat, V. Colizza, J. Pinton et al., Dynamics of Person-to-Person Interactions from Distributed RFID Sensor Networks, PLoS ONE, vol.41, issue.7, p.20657651, 2010.
DOI : 10.1371/journal.pone.0011596.s007

URL : https://hal.archives-ouvertes.fr/hal-00503275

M. Hashemian, K. Stanley, and N. Osgood, Leveraging H1N1 infection transmission modeling with proximity sensor microdata, BMC Medical Informatics and Decision Making, vol.5, issue.9, p.22551391, 2012.
DOI : 10.1371/journal.pone.0012948

M. Salathé and J. Jones, Dynamics and Control of Diseases in Networks with Community Structure, PLoS Computational Biology, vol.3, issue.4, p.20386735, 2010.
DOI : 10.1371/journal.pcbi.1000736.s002

R. Williams, Healthy Carriage of Staphylococcus Aureus: Its Prevalence and Importance, Bacteriol Rev, vol.27, pp.56-71, 1963.

H. Blok, A. Troelstra, T. Kamp-hopmans, A. Gigengack-baars, C. Vandenbroucke-grauls et al., Conclusion:, Infection Control & Hospital Epidemiology, vol.35, issue.09, pp.679-685, 2003.
DOI : 10.1086/502094

C. Köser, M. Holden, M. Ellington, E. Cartwright, N. Brown et al., Rapid Whole-Genome Sequencing for Investigation of a Neonatal MRSA Outbreak, New England Journal of Medicine, vol.366, issue.24, pp.2267-2275, 2012.
DOI : 10.1056/NEJMoa1109910

J. Kluytmans, A. Van-belkum, and H. Verbrugh, Nasal carriage of Staphylococcus aureus: epidemiology, underlying mechanisms, and associated risks, Clin Microbiol Rev, vol.10, pp.505-520, 1997.

H. Frénay, A. Bunschoten, L. Schouls, W. Leeuwen, . Van et al., Molecular typing of methicillin-resistantStaphylococcus aureus on the basis of protein A gene polymorphism, European Journal of Clinical Microbiology & Infectious Diseases, vol.259, issue.1, pp.60-64, 1996.
DOI : 10.1007/BF01586186

B. Shopsin, M. Gomez, S. Montgomery, D. Smith, M. Waddington et al., Evaluation of Protein A Gene Polymorphic Region DNA Sequencing for Typing of Staphylococcus aureus Strains, J Clin Microbiol, vol.37, pp.3556-3563, 1999.

M. Wassenberg, J. Kluytmans, R. Bosboom, A. Buiting, E. Van-elzakker et al., Rapid diagnostic testing of methicillin-resistant Staphylococcus aureus carriage at different anatomical sites: costs and benefits of less extensive screening regimens, Clinical Microbiology and Infection, vol.17, issue.11, p.21595786, 2011.
DOI : 10.1111/j.1469-0691.2011.03502.x

M. Struelens, P. Hawkey, G. French, W. Witte, and E. Tacconelli, Laboratory tools and strategies for methicillin-resistant Staphylococcus aureus screening, surveillance and typing: state of the art and unmet needs, Clinical Microbiology and Infection, vol.15, issue.2, pp.112-119, 2009.
DOI : 10.1111/j.1469-0691.2009.02698.x

F. Manian, D. Senkel, J. Zack, and L. Meyer, Among Patients Newly Admitted to an Acute Rehabilitation Unit ??????, Infection Control and Hospital Epidemiology, vol.79, issue.9, pp.516-519, 2002.
DOI : 10.1086/502099

D. Reagan, B. Doebbeling, M. Pfaller, C. Sheetz, A. Houston et al., Elimination of Coincident Staphylococcus aureus Nasal and Hand Carriage with Intranasal Application of Mupirocin Calcium Ointment, Annals of Internal Medicine, vol.114, issue.2, pp.101-106, 1991.
DOI : 10.7326/0003-4819-114-2-101

F. Parras, M. Guerrero, E. Bouza, M. Blázquez, S. Moreno et al., Comparative study of mupirocin and oral co-trimoxazole plus topical fusidic acid in eradication of nasal carriage of methicillin-resistant Staphylococcus aureus, Antimicrobial Agents and Chemotherapy, vol.39, issue.1, pp.175-179, 1995.
DOI : 10.1128/AAC.39.1.175

L. Koreen, S. Ramaswamy, E. Graviss, S. Naidich, J. Musser et al., spa Typing Method for Discriminating among Staphylococcus aureus Isolates: Implications for Use of a Single Marker To Detect Genetic Micro- and Macrovariation, Journal of Clinical Microbiology, vol.42, issue.2, pp.792-799, 2004.
DOI : 10.1128/JCM.42.2.792-799.2004

S. Harris, E. Feil, M. Holden, M. Quail, E. Nickerson et al., Evolution of MRSA During Hospital Transmission and Intercontinental Spread, Science, vol.327, issue.5964, pp.469-474, 2010.
DOI : 10.1126/science.1182395

D. Ben-david, L. Mermel, and S. Parenteau, Methicillin-resistant Staphylococcus aureus transmission: The possible importance of unrecognized health care worker carriage, American Journal of Infection Control, vol.36, issue.2, pp.93-97, 2008.
DOI : 10.1016/j.ajic.2007.05.013

B. Cookson, B. Peters, M. Webster, I. Phillips, M. Rahman et al., Staff carriage of epidemic methicillinresistant Staphylococcus aureus, J Clin Microbiol, vol.27, pp.1471-1476, 1989.

J. Onnela and N. Christakis, Spreading paths in partially observed social networks, Physical Review E, vol.85, issue.3, pp.36106-22587148, 2012.
DOI : 10.1103/PhysRevE.85.036106

L. Temime, L. Opatowski, Y. Pannet, C. Brun-buisson, P. Boëlle et al., Peripatetic health-care workers as potential superspreaders, Proceedings of the National Academy of Sciences, vol.106, issue.43, pp.18420-18425, 2009.
DOI : 10.1073/pnas.0900974106

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2775324

T. Hornbeck, D. Naylor, A. Segre, G. Thomas, T. Herman et al., Using Sensor Networks to Study the Effect of Peripatetic Healthcare Workers on the Spread of Hospital-Associated Infections, Journal of Infectious Diseases, vol.206, issue.10, pp.1549-1557, 2012.
DOI : 10.1093/infdis/jis542

J. Boyce and D. Pittet, Summary, Infection Control & Hospital Epidemiology, vol.6, issue.S12, pp.3-40, 2002.
DOI : 10.2307/30141567

D. Pittet, B. Allegranzi, H. Sax, S. Dharan, C. Pessoa-silva et al., Evidence-based model for hand transmission during patient care and the role of improved practices, The Lancet Infectious Diseases, vol.6, issue.10, pp.641-652, 2006.
DOI : 10.1016/S1473-3099(06)70600-4

V. Barclay, T. Smieszek, J. He, G. Cao, J. Rainey et al., Positive Network Assortativity of Influenza Vaccination at a High School: Implications for Outbreak Risk and Herd Immunity, PLoS ONE, vol.74, issue.5, p.24505274, 2014.
DOI : 10.1371/journal.pone.0087042.s014

T. Smieszek and M. Salathé, A low-cost method to assess the epidemiological importance of individuals in controlling infectious disease outbreaks, BMC Medicine, vol.2, issue.1, pp.35-23402633, 2013.
DOI : 10.1016/j.epidem.2010.10.001

M. Starnini, A. Machens, C. Cattuto, A. Barrat, and R. Pastor-satorras, Immunization strategies for epidemic processes in time-varying contact networks, Journal of Theoretical Biology, vol.337, pp.89-100, 2013.
DOI : 10.1016/j.jtbi.2013.07.004

URL : https://hal.archives-ouvertes.fr/hal-00821794

L. Isella, M. Romano, A. Barrat, C. Cattuto, V. Colizza et al., Close Encounters in a Pediatric Ward: Measuring Face-to-Face Proximity and Mixing Patterns with Wearable Sensors, PLoS ONE, vol.5, issue.5, p.21386902, 2011.
DOI : 10.1371/journal.pone.0017144.s004

URL : https://hal.archives-ouvertes.fr/hal-00573330

T. Smieszek, V. Barclay, I. Seeni, J. Rainey, H. Gao et al., How should social mixing be measured: comparing web-based survey and sensor-based methods, BMC Infectious Diseases, vol.8, issue.Suppl 5, pp.136-146, 2014.
DOI : 10.1186/1471-2458-8-61

J. Lucet, C. Laouenan, G. Chelius, N. Veziris, D. Lepelletier et al., Electronic Sensors for Assessing Interactions between Healthcare Workers and Patients under Airborne Precautions, PLoS ONE, vol.31, issue.5, p.22662245, 2012.
DOI : 10.1371/journal.pone.0037893.t002

URL : https://hal.archives-ouvertes.fr/hal-00706557

D. Watts and S. Strogatz, Collective dynamics of " small-world " networks, Nature, vol.393, issue.6684, pp.440-442, 1998.
DOI : 10.1038/30918

J. Hollingsworth, C. Chisholm, B. Giles, W. Cordell, and D. Nelson, How Do Physicians and Nurses Spend Their Time in the Emergency Department?, Annals of Emergency Medicine, vol.31, issue.1, pp.87-91, 1998.
DOI : 10.1016/S0196-0644(98)70287-2

M. Keeling and K. Eames, Networks and epidemic models, Journal of The Royal Society Interface, vol.2, issue.4, pp.295-307, 2005.
DOI : 10.1098/rsif.2005.0051

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC1578276

S. Bradley, M. Terpenning, M. Ramsey, L. Zarins, K. Jorgensen et al., Methicillin-resistant Staphylococcus aureus: Colonization and Infection in a Long-term Care Facility, Annals of Internal Medicine, vol.115, issue.6, pp.417-422, 1991.
DOI : 10.7326/0003-4819-115-6-417

E. Bilavsky, Y. Lerman, A. Rabinovich, J. Salomon, C. Lawrence et al., Carriage of methicillin-resistant Staphylococcus aureus on admission to European rehabilitation centres-a prospective study, Clinical Microbiology and Infection, vol.18, issue.6, pp.164-169, 2012.
DOI : 10.1111/j.1469-0691.2012.03851.x

T. Lauderdale, J. Wang, W. Lee, J. Huang, L. Mcdonald et al., Carriage rates of methicillin-resistant Staphylococcus aureus (MRSA) depend on anatomic location, the number of sites cultured, culture methods, and the distribution of clonotypes, European Journal of Clinical Microbiology & Infectious Diseases, vol.13, issue.12, pp.1553-1559, 2010.
DOI : 10.1007/s10096-010-1042-8

R. Albert and A. Barabási, Statistical mechanics of complex networks, Contact Network and In-Hospital S. aureus Dissemination, pp.47-97, 2002.
DOI : 10.1103/RevModPhys.74.47