N. S. Abed, J. Chace, A. Fleming, and J. Cowdery, Interferon-?? Regulation of B Lymphocyte Differentiation: Activation of B Cells Is a Prerequisite for IFN-??-Mediated Inhibition of B Cell Differentiation, Cellular Immunology, vol.153, issue.2, pp.356-366, 1994.
DOI : 10.1006/cimm.1994.1034

N. Araya, T. Sato, and N. Yagishita, Human T ? Lymphotropic virus type 1 (HTLV-1) and regulatory, 2011.

M. C. Avila-arcos, S. Ho, and Y. Ishida, One Hundred Twenty Years of Koala Retrovirus Evolution Determined from Museum Skins, Molecular Biology and Evolution, vol.30, issue.2, pp.299-304, 2012.
DOI : 10.1093/molbev/mss223

E. Bailes, F. Gao, and F. Bibollet-ruche, Hybrid Origin of SIV in Chimpanzees, Science, vol.300, issue.5626, 2003.
DOI : 10.1126/science.1080657

F. Bartholomew and A. Jones, Human bites: a rare risk factor for HIV transmission, AIDS, vol.20, issue.4, pp.631-636, 2006.
DOI : 10.1097/01.aids.0000210621.13825.75

M. A. Beilke, Retroviral infections : HIV and HTLV : taking stock of more than a quarter century of research, 2012.

M. Bendinelli, M. Pistello, and S. Lombardi, Feline Immunodeficiency Virus: an interesting model for AIDS studies and an important cat pathogen, Clinical Microbiology Reviews, vol.8, issue.1, pp.87-112, 1995.

A. J. Berteeaud, A. M. Bottreau, and A. Priore, Essai de correlation entre l'évolution d'une affection par Trypanosoma equiperdum et l'action d'une onde électromagnétique pulse et module, C.R.Acad.Sci, pp.1003-1006, 1971.

K. Boller, H. König, and M. Sauter, Evidence That HERV-K Is the Endogenous Retrovirus Sequence That Codes for the Human Teratocarcinoma-Derived Retrovirus HTDV, Virology, vol.196, issue.1, pp.349-353, 1993.
DOI : 10.1006/viro.1993.1487

M. Campbell and S. A. Tishkoff, African Genetic Diversity: Implications for Human Demographic History, Modern Human Origins, and Complex Disease Mapping, Annual Review of Genomics and Human Genetics, vol.9, issue.1, pp.403-433, 2008.
DOI : 10.1146/annurev.genom.9.081307.164258

L. Cao, B. Butler, and L. Tan, Murine Immunodeficiency Virus-Induced Peripheral Neuropathy and the Associated Cytokine Responses, The Journal of Immunology, vol.189, issue.7, pp.3724-3733, 2012.
DOI : 10.4049/jimmunol.1201313

L. B. Cook, M. Elemans, A. Rowan, and B. Asquith, HTLV-1: Persistence and pathogenesis, Virology, vol.435, issue.1, pp.131-140, 2013.
DOI : 10.1016/j.virol.2012.09.028

P. J. Costello, R. J. Winchester, and S. A. Curran, Psoriatic Arthrritis are characterized by CD8 and CD4 T cell clonal expansions that appear antigen driven, The Journal of Immunology, pp.2878-2886, 2001.

M. D. Daniel, N. L. Letvin, and P. Sehgal, Prevalence of antibodies to 3 retroviruses in a captive colony of macaque monkeys, International Journal of Cancer, vol.144, issue.4, pp.601-608, 1988.
DOI : 10.1002/ijc.2910410421

J. Denner and P. Young, Koala retroviruses: characterization and impact on the life of koalas, Retrovirology, vol.10, issue.1, p.108, 2013.
DOI : 10.1186/1743-422X-9-260

W. L. Dinges, J. Richardt, and D. Friedrich, Virus-Specific CD8+ T-Cell Responses Better Define HIV Disease Progression than HLA Genotype, Journal of Virology, vol.84, issue.9, pp.4461-4468, 2010.
DOI : 10.1128/JVI.02438-09

J. P. Durand, P. Tuppin, and M. P. , Increased Risk for a Second Retroviral Infection (SIV or STLV Type I) for Wild African Green Monkeys Already Infected by One Retrovirus in Senegal (West Africa), AIDS Research and Human Retroviruses, vol.11, issue.8, pp.985-988, 1995.
DOI : 10.1089/aid.1995.11.985

S. Elahi, W. Dinges, and N. Lejarcegui, Protective HIV-specific CD8+ T cells evade Treg cell suppression, Nature Medicine, vol.173, issue.8, pp.989-995, 2012.
DOI : 10.1016/j.jim.2007.03.002

R. J. Gifford, A. Katzourakis, and M. Tristem, A transitional endogenous lentivirus from the genome of a basal primate and implications for lentivirus evolution, Proceedings of the National Academy of Sciences, vol.105, issue.51, pp.20362-20367, 2008.
DOI : 10.1073/pnas.0807873105

J. Goudsmit, Viral sex: the nature of AIDS, 1997.

G. Z. Han and M. Worobey, Endogenous Lentiviral Elements in the Weasel Family (Mustelidae), Molecular Biology and Evolution, vol.29, issue.10, 2012.
DOI : 10.1093/molbev/mss126

V. M. Hirsch, G. Dapolito, and P. Johnson, Induction of AIDS by Simian Immunodeficiency Virus from an African Green Monkey: Species-specific Variation in Pathogenicity correlates with the extent of In Vivo replication, Journal of Virology, vol.69, issue.2, pp.955-967, 1995.

E. Holmes, Molecular Clocks and the Puzzle of RNA Virus Origins, Journal of Virology, vol.77, issue.7, pp.3893-3897, 2003.
DOI : 10.1128/JVI.77.7.3893-3897.2003

S. Honjo, T. Narita, and R. Kobayashi, Experimental infection of African green monkeys and cynomolgus monkeys with a SIVAGM strain isolated from a healthy African green monkey, Journal of Medical Primatology, vol.19, issue.1, pp.9-20, 1990.

E. Hooper, Sailors and star-bursts, and the arrival of HIV, BMJ, vol.315, issue.7123, pp.1689-1691, 1997.
DOI : 10.1136/bmj.315.7123.1689

D. Huminer, J. Rosenfeld, and S. Pitlik, AIDS in the Pre-AIDS Era, Clinical Infectious Diseases, vol.9, issue.6, pp.1102-1108, 1987.
DOI : 10.1093/clinids/9.6.1102

K. Ibuki, E. Ido, and S. Setiyaningsih, Isolation of STLV-I from Orangutan, a Great Ape Species in Southeast Asia, and Its Relation to Other HTLV-Is/STLV-Is, Japanese Journal of Cancer Research, vol.4, issue.1, pp.1-4, 1997.
DOI : 10.1111/j.1349-7006.1997.tb00293.x

C. Janeway, . Jr, P. Travers, and M. Walport, Immunobiology: The immune system in health and disease, 2001.

P. R. Johnson, S. Goldstein, W. T. London, A. Fomsgaard, and V. Hirsch, Molecular clones of SIVsm and SIVagm: experimental infection of Asian and African green monkeys, Journal of Medical Primatology, pp.279-286, 1990.

A. Katzourakis, M. Tristem, O. G. Pybus, and R. Gifford, Discovery and analysis of the first endogenous lentivirus, Proceedings of the National Academy of Sciences, vol.104, issue.15, pp.6261-6265, 2007.
DOI : 10.1073/pnas.0700471104

V. Lauer, A quantum theory of the Biological effects of radio-frequencies and its application to cancer, HAL-00877298, https, 2013.

V. Lauer, A model of the interaction of T lymphocytes with electromagnetic waves, HAL-00975963, 2014.

V. Lauer, An introduction to the interaction of the immune system with electromagnetic fields, HAL-01093349, 2014.

V. Lauer, Resolving apparent inconsistencies in effects of electromagnetic waves on cancer and auto-immunity, 2015.
URL : https://hal.archives-ouvertes.fr/hal-01093600

C. Lekutis and N. Letvin, MHC expression of African green monkeys of Barbados is limited in heterogeneity, Journal of Medical Primatology, vol.18, issue.2, pp.81-86, 1995.
DOI : 10.1111/j.1600-0684.1995.tb00150.x

L. Li, A. Barrett, and D. Beasley, Differential expression of domain III neutralizing epitopes on the envelope proteins of West Nile virus strains, Virology, vol.335, issue.1, pp.99-105, 2005.
DOI : 10.1016/j.virol.2005.02.011

B. Liautaud, C. Laroche, J. Duvivier, and C. Pean-guichard, Kaposi's sarcoma in Haiti: unknown reservoir or a recent appearance ?, Ann. Dermatol. Venerol, vol.110, pp.3-213, 1983.

H. F. Liu, P. Goubau, and M. Van-brussel, The three human T-lymphotropic virus type I subtypes arose from three geographically distinct simian reservoirs, Journal of General Virology, vol.77, issue.2, pp.359-368, 1996.
DOI : 10.1099/0022-1317-77-2-359

L. M. Mansky and H. Temin, Lower In Vivo Mutation Rate of Human Immunodeficiency Virus Type 1 than That Predicted from the Fidelity of Purified Reverse Transcriptase, Journal of Virology, vol.69, pp.5087-5094, 1995.

L. Mansky, In Vivo Analysis of Human T-Cell Leukemia Virus Type 1 Reverse Transcription Accuracy, Journal of Virology, vol.74, issue.20, pp.9525-9531, 2000.
DOI : 10.1128/JVI.74.20.9525-9531.2000

R. Mathieu and A. Gessain, New human retroviruses: HTLV-3 and HTLV-4, Médecine Tropicale, vol.65, issue.6, pp.525-533, 2005.

D. P. Mindell, J. W. Shultz, and P. W. Ewald, The AIDS Pandemic is New, But is HIV New?, Systematic Biology, vol.44, issue.1, pp.77-92, 1995.
DOI : 10.1093/sysbio/44.1.77

L. Montagnier, J. Aïssa, J. Ferris, J. Montagnier, and C. Lavallée, Electromagnetic signals are produced by aqueous nanostructures derived from bacterial DNA sequences, Interdisciplinary Sciences: Computational Life Sciences, vol.304, issue.2, pp.81-90, 2009.
DOI : 10.1007/s12539-009-0036-7

L. Montagnier, J. Aissa, D. Giudice, and E. , DNA waves and water, Journal of Physics: Conference Series, vol.306, 2010.
DOI : 10.1088/1742-6596/306/1/012007

E. L. Murphy, B. Wang, and R. Sacher, Respiratory and Urinary Tract Infections, Arthritis, and Asthma Associated with HTLV-I and HTLV-II Infection, Emerging Infectious Diseases, vol.10, issue.1, pp.109-116, 2004.
DOI : 10.3201/eid1001.020714

D. M. Mwaengo and F. J. Novembre, Molecular cloning and characterization of viruses isolated from chimpanzees with pathogenic human immunodeficiency virus type 1 infection, Journal of Virology, vol.72, issue.11, pp.8976-8987, 1998.

K. Nakano and T. Watanabe, HTLV-1 Rex: the courier of viral messages making use of the host vehicle, Frontiers in Microbiology, vol.3, 2012.
DOI : 10.3389/fmicb.2012.00330

F. J. Novembre, J. De-rosayro, and S. Nidtha, Rapid CD4+ T-Cell Loss Induced by Human Immunodeficiency Virus Type 1NC in Uninfected and Previously Infected Chimpanzees, Journal of Virology, vol.75, issue.3, pp.1533-1539, 2001.
DOI : 10.1128/JVI.75.3.1533-1539.2001

I. Pandrea, C. Apetrei, and J. Dufour, Simian Immunodeficiency Virus SIVagm.sab Infection of Caribbean African Green Monkeys: a New Model for the Study of SIV Pathogenesis in Natural Hosts, Journal of Virology, vol.80, issue.10, pp.4858-4867, 2006.
DOI : 10.1128/JVI.80.10.4858-4867.2006

R. Pautrizel, M. Rivière, A. Prioré, and F. Berlureau, Influence d'ondes électromagnétiques et de champs magnétiques associés sur l'immunité de la Souris infestée par Trypanosoma equiperdum, C.R.Acad.Sc, pp.579-582, 1966.

J. Pecon-slattery, C. L. Mccracken, and J. Troyer, Genomic organization, sequence divergence, and recombination of feline immunodeficiency virus from lions in the wild, BMC Genomics, vol.9, issue.1, 2008.
DOI : 10.1186/1471-2164-9-66

M. Peeters, V. Courgnaud, and B. Abela, Risk to Human Health from a Plethora of Simian Immunodeficiency Viruses in Primate Bushmeat, Emerging Infectious Diseases, vol.8, issue.5, pp.451-457, 2002.
DOI : 10.3201/eid0805.010522

D. Price, P. Goulder, and P. Klenerman, Positive selection of HIV-1 cytotoxic T lymphocyte escape variants during primary infection, Proceedings of the National Academy of Sciences, vol.94, issue.5, pp.1890-1895, 1997.
DOI : 10.1073/pnas.94.5.1890

R. M. Ribeiro, L. Qin, and L. Chavez, Estimation of the Initial Viral Growth Rate and Basic Reproductive Number during Acute HIV-1 Infection, Journal of Virology, vol.84, issue.12, pp.6096-6102, 2010.
DOI : 10.1128/JVI.00127-10

R. Rudicell, H. Jones, J. Wroblewski, and E. , Impact of Simian Immunodeficiency Virus Infection on Chimpanzee Population Dynamics, PLoS Pathogens, vol.368, issue.9, p.1001116, 2010.
DOI : 10.1371/journal.ppat.1001116.s007

H. Ruppach, P. Nara, and I. Raudonat, Human Immunodeficiency Virus (HIV)-Positive Sera Obtained Shortly after Seroconversion Neutralize Autologous HIV Type 1 Isolates on Primary Macrophages but Not on Lymphocytes, Journal of Virology, vol.74, issue.12, pp.5403-5411, 2000.
DOI : 10.1128/JVI.74.12.5403-5411.2000

N. Seliah and T. Finkel, Biochemical mechanisms of HIV induced T cell apoptosis, Cell Death and Differentiation, vol.8, issue.2, pp.127-136, 2001.
DOI : 10.1038/sj.cdd.4400822

P. M. Sharp, E. Bailes, and F. Gao, Origins and evolution of AIDS viruses: estimating the time-scale, Biochemical Society Transactions, vol.28, issue.2, pp.275-282, 2000.
DOI : 10.1042/bst0280275

P. M. Sharp, B. Hahn, L. J. Van-doorn, I. Capriles, and G. Maertens, Origins of HIV and the AIDS pandemic. Cold Springs Harbor Perspectives in Medicine Sequence evolution of the hypervariable region of the putative envelope region E2/NS1 of Hepatitis C virus is correlated with specific humoral immune responses, Journal of Virology, vol.1, issue.2, pp.6841-773, 1995.

D. Veale, C. Ritchlin, and O. Fitzgerald, Immunopathology of psoriasis and psoriatic arthritis, Annals of the Rheumatic Diseases, vol.64, issue.suppl_2, 2005.
DOI : 10.1136/ard.2004.031740

W. K. Wang, T. L. Sung, and C. Lee, Sequence Diversity of the Capsid Gene and the Nonstructural Gene NS2B of Dengue-3 Virus in Vivo, Virology, vol.303, issue.1, pp.181-191, 2002.
DOI : 10.1006/viro.2002.1635

D. Watts, Scavenging by chimpanzees at Ngogo and the relevance of chimpanzee scavenging to early hominin behavioral ecology, Journal of Human Evolution, vol.54, issue.1, pp.125-133, 2008.
DOI : 10.1016/j.jhevol.2007.07.008

J. O. Wertheim and M. Worobey, Dating the Age of the SIV Lineages That Gave Rise to HIV-1 and HIV-2, PLoS Computational Biology, vol.77, issue.5, p.1000377, 2009.
DOI : 10.1371/journal.pcbi.1000377.s009

M. Worobey, P. Telfer, and S. Souquière, Island Biogeography Reveals the Deep History of SIV, Science, vol.329, issue.5998, 2010.
DOI : 10.1126/science.1193550

URL : https://hal.archives-ouvertes.fr/pasteur-00540189

M. Worobey, M. Gemmel, and D. Teuwen, Direct evidence of extensive diversity of HIV-1 in Kinshasa by 1960, Nature, vol.54, issue.7213, pp.661-665, 1960.
DOI : 10.1038/nature07390

M. Yamashita, T. Miura, and K. Ibuki, Phylogenetic relationships of HTLV-1/STLV-1 in the world, Leukemia, vol.3, pp.50-51, 1997.

J. I. Yasunaga, T. Sakai, and K. Nosaka, Impaired production of naive T lymphocytes in human T-cell leukemia virus type I-infected individuals: its implications in the immunodeficient state, Blood, vol.97, issue.10, pp.3177-3183, 2001.
DOI : 10.1182/blood.V97.10.3177

G. Zandman-goddard and Y. Shoenfeld, HIV and autoimmunity, Autoimmunity Reviews, vol.1, issue.6, pp.329-337, 2002.
DOI : 10.1016/S1568-9972(02)00086-1

S. Zhang, C. Wood, and W. Xue, Immune suppression in calves with Bovine Immunodeficiency Virus, Clinical and Diagnostic Laboratory Immunology vol, vol.4, pp.232-235, 1997.

T. Zhu, B. T. Korber, and A. Nahmias, An African HIV-1 sequence from 1959 and implications for the origin of the pandemic Self mimicry and Antigenic variation increase pathogen sensitivity to radiofrequency exposure, 2 2, 1998.

/. Conserved, C. Non-conserved, .. , and S. , 7 5.4 AIDS is positively [resp. negatively] associated with auto-immunity problems mediated by CD8+ effector T lymphocytes [resp. CD4+ T lymphocyte/B cell association] 7 6 A causal relation between exposure to permanent electromagnetic waves and AIDS is consistent with the early history of AIDS, p.6

. New-pathogenic-variants and .. Link-with-television, 11 7 A consistent picture of the emergence of AIDS

.. Cross-species-recombination-events, Limited viability of immunodeficiency viruses after a cross-species transmission