The CONNECT project: Combining macro- and micro-structure, NeuroImage, vol.80, pp.273-82, 2013. ,
DOI : 10.1016/j.neuroimage.2013.05.055
Diffusion MRI at 25: Exploring brain tissue structure and function, NeuroImage, vol.61, issue.2, pp.324-365, 2012. ,
DOI : 10.1016/j.neuroimage.2011.11.006
Twenty-five pitfalls in the analysis of diffusion MRI data, NMR in Biomedicine, vol.2, issue.7, 2010. ,
DOI : 10.1002/nbm.1543
Artifacts and pitfalls in diffusion MRI, Journal of Magnetic Resonance Imaging, vol.98, issue.12, pp.478-88, 2006. ,
DOI : 10.1002/jmri.20683
URL : https://hal.archives-ouvertes.fr/hal-00349658
Artifacts in diffusion MRI Diffusion MRI: Theory, Methods and Applications, pp.303-321, 2011. ,
White matter integrity, fiber count, and other fallacies: The do's and don'ts of diffusion MRI, NeuroImage, vol.73, pp.239-54, 2013. ,
DOI : 10.1016/j.neuroimage.2012.06.081
Statistical issues in diffusion tensor MRI Diffusion MRI: Theory, Methods and Applications, pp.331-53, 2011. ,
Parametric and non-parametric statistical analysis of DT-MRI data, Journal of Magnetic Resonance, vol.161, issue.1, pp.1-1410, 2003. ,
DOI : 10.1016/S1090-7807(02)00178-7
Ideal spatial adaptation by wavelet shrinkage, Biometrika, vol.81, issue.3, pp.425-55, 1994. ,
DOI : 10.1093/biomet/81.3.425
Wavelet-based Rician noise removal for magnetic resonance imaging, IEEE Transactions on Image Processing, vol.8, issue.10, pp.1408-1427, 1999. ,
DOI : 10.1109/83.791966
Structure-adaptive sparse denoising for diffusion-tensor MRI, Medical Image Analysis, vol.17, issue.4, pp.442-57, 2013. ,
DOI : 10.1016/j.media.2013.01.006
URL : https://hal.archives-ouvertes.fr/hal-00850585
Adaptive multiresolution non-local means filter for three-dimensional magnetic resonance image denoising, IET Image Processing, vol.6, issue.5, pp.558-78, 2011. ,
DOI : 10.1049/iet-ipr.2011.0161
An Optimized Blockwise Nonlocal Means Denoising Filter for 3-D Magnetic Resonance Images, IEEE Transactions on Medical Imaging, vol.27, issue.4, pp.425-41906087, 2007. ,
DOI : 10.1109/TMI.2007.906087
Impact of Rician Adapted Non-Local Means Filtering on HARDI, Medical Image Computing and Computer-Assisted Intervention, pp.122-152, 2008. ,
DOI : 10.1007/978-3-540-85990-1_15
URL : https://hal.archives-ouvertes.fr/inria-00423318
HARDI Denoising: Variational Regularization of the Spherical Apparent Diffusion Coefficient sADC, Inf Process Med Imaging, vol.54, issue.6, pp.515-542, 2009. ,
DOI : 10.1002/mrm.20642
Noise-Driven Anisotropic Diffusion Filtering of MRI, IEEE Transactions on Image Processing, vol.18, issue.10, pp.2265-74, 2009. ,
DOI : 10.1109/TIP.2009.2025553
Denoising 3D MR images by the enhanced non-local means filter for Rician noise, Magnetic Resonance Imaging, vol.28, issue.10, pp.1485-96, 2010. ,
DOI : 10.1016/j.mri.2010.06.023
A variational model for denoising high angular resolution diffusion imaging data, 9th IEEE International Symposium on Biomedical Imaging (ISBI), 2012. ,
Non-Local Means Variants for Denoising of Diffusion-Weighted and Diffusion Tensor MRI, Medical Image Computing and Computer-Assisted Intervention, pp.344-51, 2007. ,
DOI : 10.1007/978-3-540-75759-7_42
URL : https://hal.archives-ouvertes.fr/inserm-00193788
Regularized, fast, and robust analytical Q-ball imaging, Magnetic Resonance in Medicine, vol.17, issue.3, pp.497-510, 2007. ,
DOI : 10.1002/mrm.21277
Optimal real-time Q-ball imaging using regularized Kalman filtering with incremental orientation sets, Medical Image Analysis, vol.13, issue.4, pp.564-79, 2009. ,
DOI : 10.1016/j.media.2009.05.008
Investigating the prevalence of complex fiber configurations in white matter tissue with diffusion magnetic resonance imaging, Human Brain Mapping, vol.45, issue.11, pp.2747-66, 2013. ,
DOI : 10.1002/hbm.22099
Spin Diffusion Measurements: Spin Echoes in the Presence of a Time???Dependent Field Gradient, The Journal of Chemical Physics, vol.42, issue.1, pp.288-92, 1965. ,
DOI : 10.1063/1.1695690
Periodic sampling in the gradient direction domain facilitates noise reduction in diffusion weighted imaging, Proceeding of 21th International Symposium on Magnetic Resonance in Medicine, 2013. ,
Optimal strategies for measuring diffusion in anisotropic systems by magnetic resonance imaging, 3<515::AID- MRM14>3.3.CO, pp.515-540, 1999. ,
value and number of gradient directions for high-angular-resolution diffusion-weighted imaging, NMR in Biomedicine, vol.34, issue.12, pp.1775-86, 2013. ,
DOI : 10.1002/nbm.3017
Analytically exact spiral scheme for generating uniformly distributed points on the unit sphere, Journal of Computational Science, vol.2, issue.1, pp.88-91, 2011. ,
DOI : 10.1016/j.jocs.2010.12.003
Composite hindered and restricted model of diffusion (CHARMED) MR imaging of the human brain, NeuroImage, vol.27, issue.1, pp.48-58, 2005. ,
DOI : 10.1016/j.neuroimage.2005.03.042
Robust determination of the fibre orientation distribution in diffusion MRI: Non-negativity constrained super-resolved spherical deconvolution, NeuroImage, vol.35, issue.4, pp.1459-72, 2007. ,
DOI : 10.1016/j.neuroimage.2007.02.016
MRtrix: Diffusion tractography in crossing fiber regions, International Journal of Imaging Systems and Technology, vol.56, issue.1, pp.53-66, 2012. ,
DOI : 10.1002/ima.22005
Dipy, a library for the analysis of diffusion MRI data, Frontiers in Neuroinformatics, vol.29, issue.22, 2014. ,
DOI : 10.1109/TMI.2010.2045126
Quantitative Comparison of Reconstruction Methods for Intra-Voxel Fiber Recovery From Diffusion MRI, IEEE Transactions on Medical Imaging, vol.33, issue.2, pp.384-99, 2014. ,
DOI : 10.1109/TMI.2013.2285500
URL : https://hal.archives-ouvertes.fr/hal-00908289
Optimal acquisition orders of diffusion-weighted MRI measurements, Journal of Magnetic Resonance Imaging, vol.27, issue.5, pp.1051-1059, 2007. ,
DOI : 10.1002/jmri.20905
Reduction of eddy-current-induced distortion in diffusion MRI using a twice-refocused spin echo, Magnetic Resonance in Medicine, vol.111, issue.1, pp.177-82, 2003. ,
DOI : 10.1002/mrm.10308
-matrix must be rotated when correcting for subject motion in DTI data, Magnetic Resonance in Medicine, vol.50, issue.6, pp.1336-1385, 2009. ,
DOI : 10.1002/mrm.21890
URL : https://hal.archives-ouvertes.fr/hal-00573304
Multiple q-shell diffusion propagator imaging, Medical Image Analysis, vol.15, issue.4, pp.603-624, 2011. ,
DOI : 10.1016/j.media.2010.07.001
URL : https://hal.archives-ouvertes.fr/hal-00531473
An automated labeling system for subdividing the human cerebral cortex on MRI scans into gyral based regions of interest, NeuroImage, vol.31, issue.3, pp.968-80, 2006. ,
DOI : 10.1016/j.neuroimage.2006.01.021
Atlas-based whole brain white matter analysis using large deformation diffeomorphic metric mapping: Application to normal elderly and Alzheimer's disease participants, NeuroImage, vol.46, issue.2, pp.486-99, 2009. ,
DOI : 10.1016/j.neuroimage.2009.01.002
NTU-90: A high angular resolution brain atlas constructed by q-space diffeomorphic reconstruction, NeuroImage, vol.58, issue.1, pp.91-100, 2010. ,
DOI : 10.1016/j.neuroimage.2011.06.021
Apparent Fibre Density: A novel measure for the analysis of diffusion-weighted magnetic resonance images, NeuroImage, vol.59, issue.4, pp.3976-94, 2012. ,
DOI : 10.1016/j.neuroimage.2011.10.045
Transient diffusion in a system partitioned by permeable barriers. Application to NMR measurements with a pulsed field gradient, The Journal of Chemical Physics, vol.69, issue.4, pp.1748-54, 1978. ,
DOI : 10.1063/1.436751
Rician Noise Removal in Diffusion Tensor MRI, Medical Image Computing and Computer-Assisted Intervention, pp.117-142, 2006. ,
DOI : 10.1007/11866565_15
Robust Rician noise estimation for MR images, Medical Image Analysis, vol.14, issue.4, pp.483-93, 2010. ,
DOI : 10.1016/j.media.2010.03.001
Periodic spherical spiral sampling in gradient direction domain improves diffusion MRI accuracy, Proceeding of HARDI Reconstruction Challenge of IEEE 10th International Symposium on Biomedical Imaging, 2013. ,
Denoising of Dynamic Contrast-Enhanced MR Images Using Dynamic Nonlocal Means, IEEE Transactions on Medical Imaging, vol.29, issue.2, pp.302-312, 2009. ,
DOI : 10.1109/TMI.2009.2026575
lop-DWI: A Novel Scheme for Pre-Processing of Diffusion-Weighted Images in the Gradient Direction Domain, Frontiers in Neurology, vol.29, issue.4, p.12, 2014. ,
DOI : 10.1109/TMI.2009.2026575
URL : https://hal.archives-ouvertes.fr/hal-01103577
This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY) The use, distribution or reproduction in other forums is permitted, provided the original author(s) or licensor are credited and that the original publication in this journal is cited, This article was submitted to Brain Imaging Methods, 2015. ,