J. M. Ball, Some Open Problems in Elasticity, pp.3-59, 2002.
DOI : 10.1007/0-387-21791-6_1

G. I. Bell, Models for the specific adhesion of cells to cells, Science, vol.200, issue.4342, pp.618-627, 1978.
DOI : 10.1126/science.347575

I. Benichou and S. Givli, The hidden ingenuity in titin structure, Applied Physics Letters, vol.98, issue.9, p.91904, 2011.
DOI : 10.1063/1.3558901

I. Benichou and S. Givli, Structures undergoing discrete phase transformation, Journal of the Mechanics and Physics of Solids, vol.61, issue.1, pp.94-113, 2013.
DOI : 10.1016/j.jmps.2012.08.009

L. L. Bonilla, A. Carpio, A. Prados, and R. R. Rosales, Ripples in a string coupled to Glauber spins, Physical Review E, vol.85, issue.3, p.31125, 2012.
DOI : 10.1103/PhysRevE.85.031125

T. Bornschlögl, M. Rief, N. Bosaeus, A. H. El-sagheer, T. Brown et al., Single Molecule Unzipping of Coiled Coils: Sequence Resolved Stability Profiles Tension induces a base-paired overstretched DNA conformation, Proc. Natl. Acad. Sci. U.S.A. 109, pp.15179-15184, 2006.

M. Caruel, J. M. Allain, L. Truskinovsky, B. Chen, and H. Gao, Muscle as a metamaterial operating near a critical point Motor force homeostasis in skeletal muscle contraction, Phys. Rev. Lett. Biophys. J, vol.110, issue.101, pp.396-403, 2011.

J. E. Cohen and P. Horowitz, Paradoxical behaviour of mechanical and electrical networks, Nature, vol.352, issue.6337, pp.699-701, 1991.
DOI : 10.1038/352699a0

T. Dauxois, S. Lepri, and S. Ruffo, Clustering and ensembles inequivalence in the ??4 and ??6 mean-field Hamiltonian models, Communications in Nonlinear Science and Numerical Simulation, vol.8, issue.3-4, pp.375-387, 2003.
DOI : 10.1016/S1007-5704(03)00055-8

URL : https://hal.archives-ouvertes.fr/hal-01140182

V. Decostre, P. Bianco, V. Lombardi, and G. Piazzesi, Effect of temperature on the working stroke of muscle myosin, Proc. Natl. Acad. Sci. USA, pp.13927-13932, 2005.
DOI : 10.1073/pnas.0506795102

R. C. Desai and R. Zwanzig, Statistical mechanics of a nonlinear stochastic model, Journal of Statistical Physics, vol.15, issue.1, pp.1-24, 1978.
DOI : 10.1007/BF01020331

H. Dietz and M. Rief, Elastic Bond Network Model for Protein Unfolding Mechanics, Physical Review Letters, vol.100, issue.9, p.98101, 2008.
DOI : 10.1103/PhysRevLett.100.098101

T. Erdmann, P. J. Albert, and U. S. Schwarz, Stochastic dynamics of small ensembles of non-processive molecular motors: The parallel cluster model, The Journal of Chemical Physics, vol.139, issue.17, p.175104, 2013.
DOI : 10.1063/1.4827497

T. Erdmann and U. Schwarz, Stochastic Force Generation by Small Ensembles of Myosin II Motors, Physical Review Letters, vol.108, issue.18, 2012.
DOI : 10.1103/PhysRevLett.108.188101

T. Erdmann and U. S. Schwarz, Impact of receptor-ligand distance on adhesion cluster stability, The European Physical Journal E, vol.106, issue.2, pp.123-137, 2007.
DOI : 10.1140/epje/e2007-00019-8

L. E. Ford, A. F. Huxley, and R. M. Simmons, The relation between stiffness and filament overlap in stimulated frog muscle fibres., The Journal of Physiology, vol.311, issue.1, pp.219-249, 1981.
DOI : 10.1113/jphysiol.1981.sp013582

H. Gao, J. Qian, and B. Chen, Probing mechanical principles of focal contacts in cell-matrix adhesion with a coupled stochastic-elastic modelling framework, Journal of The Royal Society Interface, vol.106, issue.52, pp.1217-1232, 2011.
DOI : 10.1073/pnas.0904565106

P. G. De-gennes, Maximum pull out force on DNA hybrids, Comptes Rendus de l'Acad??mie des Sciences - Series IV - Physics, vol.2, issue.10, pp.1505-1508, 2001.
DOI : 10.1016/S1296-2147(01)01287-2

U. Gerland, R. Bundschuh, and T. Hwa, Mechanically Probing the Folding Pathway of Single RNA Molecules, Biophysical Journal, vol.84, issue.5, pp.2831-2840, 2003.
DOI : 10.1016/S0006-3495(03)70012-5

T. Guerin, J. Prost, and J. F. Joanny, Dynamical behavior of molecular motor assemblies in the rigid and crossbridge models, The European Physical Journal E, vol.94, issue.6, p.60, 2011.
DOI : 10.1140/epje/i2011-11060-5

A. N. Gupta, A. Vincent, K. Neupane, H. Yu, F. Wang et al., Experimental validation of free-energy-landscape reconstruction from non-equilibrium single-molecule force spectroscopy measurements, Nature Physics, vol.137, issue.8, pp.631-634, 2011.
DOI : 10.1126/science.1151298

A. F. Huxley and R. M. Simmons, Proposed Mechanism of Force Generation in Striated Muscle, Nature, vol.7, issue.5321, pp.533-538, 1971.
DOI : 10.1038/233533a0

H. Huxley, A. Stewart, H. Sosa, and T. Irving, X-ray diffraction measurements of the extensibility of actin and myosin filaments in contracting muscle, Biophysical Journal, vol.67, issue.6, pp.2411-2421, 1994.
DOI : 10.1016/S0006-3495(94)80728-3

F. Jülicher and J. Prost, Cooperative Molecular Motors, Physical Review Letters, vol.75, issue.13, pp.2618-2621, 1995.
DOI : 10.1103/PhysRevLett.75.2618

K. Kometani and H. Shimizu, A study of self-organizing processes of nonlinear stochastic variables, Journal of Statistical Physics, vol.11, issue.6, pp.473-490, 1975.
DOI : 10.1007/BF01013146

M. Linari, M. Caremani, and V. Lombardi, A kinetic model that explains the effect of inorganic phosphate on the mechanics and energetics of isometric contraction of fast skeletal muscle, Proceedings of the Royal Society B: Biological Sciences, vol.67, issue.1668, pp.19-27, 2010.
DOI : 10.1098/rspb.2009.0177

J. Liphardt, B. Onoa, S. B. Smith, I. Tinoco, and C. Bustamante, Reversible Unfolding of Single RNA Molecules by Mechanical Force, Science, vol.292, issue.5517, pp.733-737, 2001.
DOI : 10.1126/science.1058498

F. Manca, S. Giordano, P. L. Palla, F. Cleri, and L. Colombo, Two-state theory of single-molecule stretching experiments, Physical Review E, vol.87, issue.3, p.32705, 2013.
DOI : 10.1103/PhysRevE.87.032705

URL : https://hal.archives-ouvertes.fr/hal-00800580

L. Marcucci and L. Truskinovsky, Mechanics of the power stroke in myosin II, Physical Review E, vol.81, issue.5, p.51915, 2010.
DOI : 10.1103/PhysRevE.81.051915

URL : https://hal.archives-ouvertes.fr/hal-00547955

S. Mijailovich, J. Fredberg, and J. Butler, On the theory of muscle contraction: filament extensibility and the development of isometric force and stiffness, Biophysical Journal, vol.71, issue.3, pp.1475-1484, 1996.
DOI : 10.1016/S0006-3495(96)79348-7

V. Muñoz, E. R. Henry, J. Hofrichter, and W. A. Eaton, A statistical mechanical model for ??-hairpin kinetics, Proceedings of the National Academy of Sciences, vol.95, issue.11, pp.5872-5879, 1998.
DOI : 10.1073/pnas.95.11.5872

Z. G. Nicolaou and A. E. Motter, Mechanical metamaterials with negative compressibility transitions, Nature Materials, vol.97, issue.7, pp.608-613, 2012.
DOI : 10.1038/nmat3331

G. Piazzesi, M. Dolfi, E. Brunello, L. Fusi, M. Reconditi et al., The myofilament elasticity and its effect on kinetics of force generation by the myosin motor, Archives of Biochemistry and Biophysics, vol.552, issue.553, pp.552-553, 2014.
DOI : 10.1016/j.abb.2014.02.017

G. Piazzesi, L. Lucii, and V. Lombardi, The size and the speed of the working stroke of muscle myosin and its dependence on the force, The Journal of Physiology, vol.67, issue.1, pp.145-151, 2002.
DOI : 10.1113/jphysiol.2002.028969

G. Piazzesi, M. Reconditi, M. Linari, L. Lucii, P. Bianco et al., Skeletal Muscle Performance Determined by Modulation of Number of Myosin Motors Rather Than Motor Force or Stroke Size, Cell, vol.131, issue.4, pp.784-795, 2007.
DOI : 10.1016/j.cell.2007.09.045

A. Prados, A. Carpio, and L. L. Bonilla, Spin-oscillator model for the unzipping of biomolecules by mechanical force, Physical Review E, vol.86, issue.2, p.21919, 2012.
DOI : 10.1103/PhysRevE.86.021919

G. Puglisi and L. Truskinovsky, Mechanics of a discrete chain with bi-stable elements, Journal of the Mechanics and Physics of Solids, vol.48, issue.1, pp.1-27, 2000.
DOI : 10.1016/S0022-5096(99)00006-X

M. Reconditi, M. Linari, L. Lucii, A. Stewart, Y. Sun et al., The myosin motor in muscle generates a smaller and slower working stroke at higher load, Nature, vol.428, issue.6982, pp.578-581, 2004.
DOI : 10.1038/nature02380

D. Smith, M. Geeves, J. Sleep, and S. Mijailovich, Towards a Unified Theory of Muscle Contraction. I: Foundations, Annals of Biomedical Engineering, vol.57, issue.Pt 2, pp.1624-1640, 2008.
DOI : 10.1007/s10439-008-9536-6

A. Srivastava and R. Granek, Cooperativity in Thermal and Force-Induced Protein Unfolding: Integration of Crack Propagation and Network Elasticity Models, Physical Review Letters, vol.110, issue.13, 2013.
DOI : 10.1103/PhysRevLett.110.138101

N. Thomas and Y. Imafuku, Effect of elastic energy on the folding of an RNA hairpin, Journal of Theoretical Biology, vol.312, pp.96-104, 2012.
DOI : 10.1016/j.jtbi.2012.07.021

L. Truskinovsky and A. Vainchtein, Peierls-Nabarro landscape for martensitic phase transitions, Physical Review B, vol.67, issue.17, 2003.
DOI : 10.1103/PhysRevB.67.172103

Z. Tshiprut and M. Urbakh, Exploring hysteresis and energy dissipation in single-molecule force spectroscopy, The Journal of Chemical Physics, vol.130, issue.8, p.84703, 2009.
DOI : 10.1063/1.3077867

K. Wakabayashi, Y. Sugimoto, H. Tanake, Y. Ueno, Y. Takezawa et al., X-ray diffraction evidence for the extensibility of actin and myosin filaments during muscle contraction, Biophysical Journal, vol.67, issue.6, pp.2422-2435, 1994.
DOI : 10.1016/S0006-3495(94)80729-5

M. T. Woodside, C. Garcia-garcia, and S. M. Block, Folding and unfolding single RNA molecules under tension, Current Opinion in Chemical Biology, vol.12, issue.6, pp.640-646, 2008.
DOI : 10.1016/j.cbpa.2008.08.011

URL : http://www.ncbi.nlm.nih.gov/pmc/articles/PMC2855187

H. Yao and H. Gao, Mechanics of robust and releasable adhesion in biology: Bottom???up designed hierarchical structures of gecko, Journal of the Mechanics and Physics of Solids, vol.54, issue.6, pp.1120-1146, 2006.
DOI : 10.1016/j.jmps.2006.01.002

B. Yurke, A. J. Turberfield, A. P. Mills, F. C. Simmel, and J. L. Neumann, A DNA-fuelled molecular machine made of DNA, Nature, vol.406, pp.605-608, 2000.