Skip to Main content Skip to Navigation
New interface
Journal articles

Metavir: a web server dedicated to virome analysis.

Abstract : SUMMARY: Metavir is a web server dedicated to the analysis of viral metagenomes (viromes). In addition to classical approaches for analyzing metagenomes (general sequence characteristics, taxonomic composition), new tools developed specifically for viral sequence analysis make it possible to: (i) explore viral diversity through automatically constructed phylogenies for selected marker genes, (ii) estimate gene richness through rarefaction curves and (iii) perform cross-comparison against other viromes using sequence similarities. Metavir is thus unique as a platform that allows a comprehensive virome analysis. AVAILABILITY: Metavir is freely available online at: http://metavir-meb.univ-bpclermont.fr. CONTACT: simon.roux@univ-bpclermont.fr. SUPPLEMENTARY INFORMATION: Supplementary data are available at Bioinformatics online.
Complete list of metadata

https://hal.archives-ouvertes.fr/hal-00841495
Contributor : François Enault Connect in order to contact the contributor
Submitted on : Thursday, July 4, 2013 - 10:26:33 PM
Last modification on : Tuesday, October 18, 2022 - 4:20:14 AM

Links full text

Identifiers

Citation

Simon Roux, Michaël Faubladier, Antoine Mahul, Nils Paulhe, Aurélien Bernard, et al.. Metavir: a web server dedicated to virome analysis.. Bioinformatics, 2011, 27 (21), pp.3074-5. ⟨10.1093/bioinformatics/btr519⟩. ⟨hal-00841495⟩

Share

Metrics

Record views

380