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BioNLP Shared Task 2011 - Bacteria Gene Interactions and Renaming

Abstract : We present two related tasks of the BioNLP Shared Tasks 2011: Bacteria Gene Renaming (Rename) and Bacteria Gene Interactions (GI). We detail the objectives, the corpus specification, the evaluation metrics, and we summarize the participants' results. Both issued from PubMed scientific literature abstracts, the Rename task aims at extracting gene name synonyms, and the GI task aims at extracting genic interaction events, mainly about gene transcriptional regulations in bacteria.
Keywords : bacteries
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https://hal.archives-ouvertes.fr/hal-00641586
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Submitted on : Wednesday, November 16, 2011 - 11:22:49 AM
Last modification on : Tuesday, September 7, 2021 - 3:33:01 PM
Long-term archiving on: : Friday, February 17, 2012 - 2:25:53 AM

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Julien Jourde, Alain-Pierre Manine, Philippe Veber, Karen Fort, Robert Bossy, et al.. BioNLP Shared Task 2011 - Bacteria Gene Interactions and Renaming. BioNLP Shared Task 2011 ACL Workshop, Jun 2011, Portland, United States. pp.65-73. ⟨hal-00641586⟩

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