Skip to Main content Skip to Navigation
Journal articles

HoSeql : automated homologous sequence identification in gene family databases

Abstract : We present a web service allowing to automatically assign sequences to homologous gene families from a set of databases. After identification of the most similar gene family to the query sequence, this sequence is added to the whole alignment and the phylogenetic tree of the family is rebuilt. Thus, the phylogenetic position of the query sequence in its gene family can be easily identified.
Document type :
Journal articles
Complete list of metadata

https://hal.archives-ouvertes.fr/hal-00427893
Contributor : Stéphane Delmotte Connect in order to contact the contributor
Submitted on : Wednesday, October 28, 2009 - 5:18:30 PM
Last modification on : Monday, October 4, 2021 - 2:52:05 PM

Links full text

Identifiers

Collections

`

Citation

Anne-Muriel Arigon Chifolleau, G. Perrière, Manolo Gouy. HoSeql : automated homologous sequence identification in gene family databases. Bioinformatics, Oxford University Press (OUP), 2006, 22 (14), pp.1786-1787. ⟨10.1093/bioinformatics/btl179⟩. ⟨hal-00427893⟩

Share

Metrics

Record views

257