Mutation-Tolerant Protein Identification by Mass Spectrometry, Journal of Computational Biology, vol.7, issue.6, pp.777-87, 2000. ,
DOI : 10.1089/10665270050514927
The Power and the Limitations of Cross-Species Protein Identification by Mass Spectrometry-driven Sequence Similarity Searches, Molecular & Cellular Proteomics, vol.3, issue.3, pp.238-287, 2004. ,
DOI : 10.1074/mcp.M300073-MCP200
A workflow to increase the detection rate of proteins from unsequenced organisms in high-throughput proteomics experiments, PROTEOMICS, vol.37, issue.23, pp.4245-54, 2007. ,
DOI : 10.1002/pmic.200700474
Sequencing Algorithms, Journal of Proteome Research, vol.5, issue.11, pp.3018-3046, 2006. ,
DOI : 10.1021/pr060222h
Assessing peptidede novo sequencing algorithms performance on large and diverse data sets, PROTEOMICS, vol.4, issue.17, pp.3051-3055, 2007. ,
DOI : 10.1002/pmic.200700224
An approach to correlate tandem mass spectral data of peptides with amino acid sequences in a protein database, Journal of the American Society for Mass Spectrometry, vol.7, issue.11, pp.976-989, 1994. ,
DOI : 10.1016/1044-0305(94)80016-2
Probability-based protein identification by searching sequence databases using mass spectrometry data, Electrophoresis, vol.447, issue.18, pp.3551-67, 1999. ,
DOI : 10.1002/(SICI)1522-2683(19991201)20:18<3551::AID-ELPS3551>3.0.CO;2-2
Method to Correlate Tandem Mass Spectra of Modified Peptides to Amino Acid Sequences in the Protein Database, Analytical Chemistry, vol.67, issue.8, pp.1426-1462, 1995. ,
DOI : 10.1021/ac00104a020
Efficiency of Database Search for Identification of Mutated and Modified Proteins via Mass Spectrometry, Genome Research, vol.11, issue.2, pp.290-299, 2001. ,
DOI : 10.1101/gr.154101
Identification of post-translational modifications by blind search of mass spectra, Nature Biotechnology, vol.3, issue.12, pp.1562-1569, 2005. ,
DOI : 10.1038/nbt1168
De novo peptide sequencing via tandem mass spectrometry, Journal of Computational Biology, vol.6, pp.3-4, 1999. ,
De Novo Peptide Sequencing and Identification with Precision Mass Spectrometry, Journal of Proteome Research, vol.6, issue.1, pp.114-137, 2007. ,
DOI : 10.1021/pr060271u