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53 documents classés par : Date Titre Nom du premier auteur Type de documents Date de dépôt

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DSK: k-mer counting with very low memory usage Rizk G., Lavenier D., Chikhi R. Bioinformatics (2013) Advance access [hal-00778473 - version 1]

Genome scans reveal candidate regions involved in the adaptation to host plant in the pea aphid complex. Jaquiéry J., Stoeckel S., Nouhaud P., Mieuzet L., Mahéo F., Legeai F., Bernard N., Bonvoisin A., Vitalis R., Simon J.-C. Molecular Ecology 21, 21 (2012) 5251-64 [hal-00753439 - version 1]

Optimal DALI protein structure alignment Wohlers I., Andonov R., Klau G. W. IEEE/ACM Transactions on Computational Biology and Bioinformatics (2012) 20 [hal-00685824 - version 2]

Oocyte-somatic cells interactions, lessons from evolution. Charlier C., Montfort J., Chabrol O., Brisard D., Nguyen T., Le Cam A., Richard-Parpaillon L., Pontarotti P., Moreews F., Uzbekova S. et al BMC Genomics (2012) [hal-00753310 - version 1]

Compareads: comparing huge metagenomic experiments Maillet N., Lemaitre C., Chikhi R., Lavenier D., Peterlongo P. RECOMB Comparative Genomics 2012, Brésil (2012) [hal-00720951 - version 1]

Models of Tet-On System with Epigenetic Effects Harmer R., Krivine J., Laruelle E., Lhoussaine C., Madelaine G., Nebut M. Computational Methods in Systems Biology 2012 (CMSB 2012, Flashposter), Royaume-Uni (2012) [hal-00725553 - version 1]

LNA: Fast Protein Classification Using A Laplacian Characterization of Tertiary Structure Bonnel N., Marteau P.-F. Transactions on Computational Biology and Bioinformatics, IEEE/ACM 9 , Issue: 5 (2012) 1451 - 1458 [hal-00639663 - version 1]

Transcriptomic profiling of the reproductive mode switch in the pea aphid in response to natural autumnal photoperiod. Le Trionnaire G., Jaubert-Possamai S., Bonhomme J., Gauthier J.-P., Guernec G., Le Cam A., Legeai F., Monfort J., Tagu D. Journal of Insect Physiology (2012) epub ahead of print [hal-00753429 - version 1]

Space-efficient and exact de Bruijn graph representation based on a Bloom filter Chikhi R., Rizk G. In Algorithms in Bioinformatics - WABI 2012, Slovenia (2012) [hal-00753930 - version 1]

BlastGraph: intensive approximate pattern matching in string graphs and de-Bruijn graphs Holley G., Peterlongo P. PSC 2012, Tchèque, République (2012) [hal-00711911 - version 1]