%0 Journal Article
%T Effect of physical sediments reworking on hydrocarbon degradation and bacterial community structure in marine coastal sediments.
%+ Equipe Environnement et Microbiologie (EEM )
%+ Institut méditerranéen d'océanologie (MIO)
%+ MEB
%+ Centre de documentation de recherche et d'expérimentations sur les pollutions accidentelles des eaux (Cedre)
%+ Laboratoire Ecologie Fonctionnelle et Environnement (LEFE)
%A Duran, Robert
%A Bonin, Patricia
%A Jezequel, Ronan
%A Dubosc, Karine
%A Gassie, Claire
%A Terrisse, Fanny
%A Abella, Justine
%A Cagnon, Christine
%A Militon, Cécile
%A Michotey, Valerie
%A Gilbert, Franck
%A Cuny, Philippe
%A Cravo-Laureau, Cristiana
%< avec comité de lecture
%Z MIO:15-044
%@ 0944-1344
%J Environmental Science and Pollution Research
%I Springer Verlag
%V 22
%N 20
%P 15248-15259
%8 2015-04-07
%D 2015
%R 10.1007/s11356-015-4373-2
%M 25847440
%K Bioremediation
%K Bacteria
%K Oil pollution
%K Harrowing
%K Mesocosms
%K T-RFLP
%K Co-occurrence network
%K Community structure
%Z Environmental Sciences/Biodiversity and Ecology
%Z Life Sciences [q-bio]/Ecology, environment/Symbiosis
%Z Life Sciences [q-bio]/Biochemistry, Molecular Biology/Molecular biologyJournal articles
%X The present study aimed to examine whether the physical reworking of sediments by harrowing would be suitable for favouring the hydrocarbon degradation in coastal marine sediments. Mudflat sediments were maintained in mesocosms under conditions as closer as possible to those prevailing in natural environments with tidal cycles. Sediments were contaminated with Ural blend crude oil, and in half of them, harrowing treatment was applied in order to mimic physical reworking of surface sediments. Hydrocarbon distribution within the sediment and its removal was followed during 286 days. The harrowing treatment allowed hydrocarbon compounds to penetrate the first 6 cm of the sediments, and biodegradation indexes (such as n-C18/phytane) indicated that biodegradation started 90 days before that observed in untreated control mesocosms. However, the harrowing treatment had a severe impact on benthic organisms reducing drastically the macrofaunal abundance and diversity. In the harrowing-treated mesocosms, the bacterial abundance, determined by 16S rRNA gene Q-PCR, was slightly increased; and terminal restriction fragment length polymorphism (T-RFLP) analyses of 16S rRNA genes showed distinct and specific bacterial community structure. Co-occurrence network and canonical correspondence analyses (CCA) based on T-RFLP data indicated the main correlations between bacterial operational taxonomic units (OTUs) as well as the associations between OTUs and hydrocarbon compound contents further supported by clustered correlation (ClusCor) analysis. The analyses highlighted the OTUs constituting the network structural bases involved in hydrocarbon degradation. Negative correlations indicated the possible shifts in bacterial communities that occurred during the ecological succession.
%G English
%L hal-01201709
%U https://hal.science/hal-01201709
%~ SDE
%~ INSU
%~ METEO
%~ UNIV-TLSE3
%~ UNIV-TLN
%~ CNRS
%~ UNIV-AMU
%~ UNIV-PAU
%~ CNES
%~ OMP
%~ OMP-ECOLAB
%~ MIO
%~ OSU-INSTITUT-PYTHEAS
%~ GIP-BE
%~ IPREM
%~ INC-CNRS
%~ IPREM-CME
%~ MIO-MEB
%~ ANR
%~ TOULOUSE-INP
%~ UNIV-UT3
%~ UT3-INP
%~ UT3-TOULOUSEINP
%~ TEST2-HALCNRS