Capitalising on Opportunistic Data for Monitoring Species Relative Abundances

Christophe Giraud (1, 2) , Clément Calenge (3) , Camille Coron (2) , Romain Julliard (4)

1 CMAP - Centre de Mathématiques Appliquées - Ecole Polytechnique
2 LM-Orsay - Laboratoire de Mathématiques d'Orsay
3 Oncfs
4 MNHN - Muséum national d'Histoire naturelle

With the internet, a massive amount of information on species abundance can be collected under citizen science programs. However, these data are often difficult to use directly in statistical inference, as their collection is generally opportunistic, and the distribution of the sampling effort is often not known. In this paper, we develop a general statistical framework to combine such ``opportunistic data'' with data collected using schemes characterized by a known sampling effort. Under some structural assumptions regarding the sampling effort and detectability, our approach allows to estimate the relative abundance of several species in different sites. It can be implemented through a simple generalized linear model. We illustrate the framework with typical bird datasets from the Aquitaine region, south-western France. We show that, under some assumptions, our approach provides estimates that are more precise than the ones obtained from the dataset with a known sampling effort alone. When the opportunistic data are abundant, the gain in precision may be considerable, especially for the rare species. We also show that estimates can be obtained even for species recorded only in the opportunistic scheme. Opportunistic data combined with a relatively small amount of data collected with a known effort may thus provide access to accurate and precise estimates of quantitative changes in relative abundance over space and/or time.

Mots clés: crowdsourcing data; relative abundance estimation; participative science; multi-sites multi-species data

Domaines: Applications [stat.AP]; Biodiversité et Ecologie; Statistiques [math.ST]

Christophe Giraud, Clément Calenge, Camille Coron, Romain Julliard. Capitalising on Opportunistic Data for Monitoring Species Relative Abundances. 2013. ⟨hal-01021396v3⟩