Cyclic negative feedback systems: what is the chance of oscillation?
Résumé
Many biological oscillators have a cyclic structure consisting of negative feedback loops. In this paper, we analyze the impact that the addition of a positive or a negative self-feedback loop has on the oscillatory behaviour of the three negative feedback oscillators proposed by Tsai et al (Science 231:126-129, 2008) where, in contast with numerous oscillator models, the interactions between elements occur via the modulation of the degradation rates. Through analytical and computational studies we show that an additional self-feedback affects the dynamical behaviour. In the high cooperativity limit, i.e. for large Hill coefficients, we derive exact analytical conditions for oscillations and show that the relative location between the dissociation constants of the Hill functions and the ratio of kinetic parameters determines the possibility of oscillatory activities. We compute analytically the probability of oscillations for the three models and show that the smallest domain of periodic behaviour is obtained for the negative-plus-negative feedback system whereas the additional positive self-feedback loop does not modify significantly the chance to oscillate. We numerically investigate to what extent the properties obtained in the sharp situation applied in the smooth case. Results suggest that a switch-like coupling behaviour, a time-scale separation and a repressilator-type architecture with an even number of elements facilitate the emergence of sustained oscillations in biological systems. An additional positive self-feedback loop produces robustness and adaptability whereas an additional negative self-feedback loop reduces the chance to oscillate.
Domaines
Systèmes dynamiques [math.DS]
Origine : Fichiers produits par l'(les) auteur(s)
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