Guidelines for reporting the use of gel electrophoresis in proteomics.

Frank Gibson (1) , Leigh Anderson (2) , Gyorgy Babnigg (3) , Mark D. Baker (4) , Matthias Berth (5) , Pierre-Alain Binz (6, 7) , Andy Borthwick (8) , Phil Cash (9) , Billy W Day (10) , David B Friedman (11) , Donita Garland (12) , Howard B Gutstein (13) , Christine Hoogland (6) , Neil A Jones (14) , Alamgir Khan (4) , Joachim Klose (15) , Angus I Lamond (16) , Peter F Lemkin (17) , Kathryn S Lilley (18) , Jonathan Minden (19) , Nicholas J Morris (1) , Norman W Paton (20) , Michael R Pisano (21) , John E Prime (22) , Thierry Rabilloud (23) , David A Stead (24) , Chris F Taylor (25, 26) , Hans Voshol (27) , Anil Wipat (28) , Andrew R Jones (29)

1 Institute for Cell and Molecular Biosciences
2 Plasma Proteome Institute
3 ANL - Argonne National Laboratory [Lemont]
4 Australian Proteome Analysis Facility
5 Decodon, GmbH
6 SIB - Swiss Institute of Bioinformatics [Genève]
7 GeneBio SA
8 Nonlinear Dynamics
9 Department of Medical Microbiology
10 Department of Pharmaceutical Sciences, Department of Chemistry, Proteomics Core Lab
11 Mass Spectrometry Research Center, Proteomics Laboratory
12 National Eye Institute
13 Departments of Anesthesiology and Molecular Genetics
14 Disease & Biomarker Proteomics, Genomic and Proteomic Sciences, Genetics Research
15 Institute of Human Genetics
16 Wellcome Trust Biocentre MSI/WTB Complex
17 NCI-NIH - National Cancer Institute [Bethesda]
18 Cambridge Centre for Proteomics, Department of Biochemistry
19 CMU - Carnegie Mellon University [Pittsburgh]
20 School of Computer Science [Manchester]
21 Proteomic Research Services
22 KuDOS Pharmaceuticals
23 BBSI - Biochimie et biophysique des systèmes intégrés
24 Aberdeen Proteomics, School of Medical Sciences
25 EMBL-EBI - European Bioinformatics Institute [Hinxton]
26 NERC Environmental Bioinformatics Centre
27 NIBR - Novartis Institutes for BioMedical Research
28 School of Computing Science [Newcastle]
29 Department of Pre-clinical Veterinary Science, Faculty of Veterinary Science

the MIAPE Gel Electrophoresis (MIAPE-GE) guidelines specify the minimum information that should be provided when reporting the use of n-dimensional gel electrophoresis in a proteomics experiment. Developed through a joint effort between the gel-based analysis working group of the Human Proteome Organisation's Proteomics Standards Initiative (HUPO-PSI; http://www.psidev.info/) and the wider proteomics community, they constitute one part of the overall Minimum Information about a Proteomics Experiment (MIAPE) documentation system published last August in Nature Biotechnology

Domaines: Génomique, Transcriptomique et Protéomique [q-bio.GN]

Frank Gibson, Leigh Anderson, Gyorgy Babnigg, Mark D. Baker, Matthias Berth, et al.. Guidelines for reporting the use of gel electrophoresis in proteomics.. Nat Biotechnol, 2008, 26 (8), pp.863-4. ⟨10.1038/nbt0808-863⟩. ⟨hal-00373319⟩